Pairwise Alignments

Query, 263 a.a., endonuclease VIII from Pectobacterium carotovorum WPP14

Subject, 271 a.a., formamidopyrimidine-DNA glycosylase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 63.9 bits (154), Expect = 3e-15
 Identities = 68/275 (24%), Positives = 117/275 (42%), Gaps = 19/275 (6%)

Query: 1   MPEGPEIRRAADKLVEAVVGKTLTRVWFAFPELKLYEAEL----VGQQVRQIETRGKALL 56
           MPE PE+      +   +V +T+  +    P L+    EL    +GQ +RQ+  R K LL
Sbjct: 1   MPELPEVEVTRQGITPYLVDQTVVDLIVRNPSLRWPVPELAKQIIGQTIRQVRRRAKYLL 60

Query: 57  TYFSNDRVLYSHNQLYGVWRVVNAGESPETKRDLRVRLETQDRAILLYSAS---DIEMLT 113
                   +  H  + G  R++   ++P  K D  + L   +  IL ++        +  
Sbjct: 61  IDTDAGTSIV-HLGMSGSLRIL-PHDTPVEKHD-HIDLVLANGRILRFNDPRRFGAWLWC 117

Query: 114 LETLSTHPFLQRIGPDVLDLSLTPEQVCERLLLPRFRRRQFSGLLLDQAFLAGLGNYLRV 173
                 HP L+++GP+ L  +    Q+   L     +++     L+D   + G+GN    
Sbjct: 118 QLPEEAHPLLEKLGPEPLTDAFNVNQLAASLA---GKKKAIKLCLMDNHIVVGVGNIYAN 174

Query: 174 EILWQAQLAPQHTAAQLNEEQLQTLSHALLEIPRLSYNTRGTV--DENRHHG--AIFSFK 229
           E L+ A + P+  A +++ E+L  L   + +I   +    GT   D     G    F+ K
Sbjct: 175 EALFAAGIHPEAEAGKIDIERLTVLVAEVKQILAHAIKQGGTTLKDFTNADGKPGYFAQK 234

Query: 230 --VFHREGERCERCGGIIERTMLSSRPFYWCPHCQ 262
             V+ R GE C +CG ++    L  R   +C  CQ
Sbjct: 235 LHVYGRGGETCTQCGNLLSEIRLGQRTTVFCSICQ 269