Pairwise Alignments

Query, 500 a.a., efflux RND transporter periplasmic adaptor subunit from Pectobacterium carotovorum WPP14

Subject, 495 a.a., RND family efflux transporter, MFP subunit from Pseudomonas stutzeri RCH2

 Score =  315 bits (808), Expect = 2e-90
 Identities = 185/475 (38%), Positives = 259/475 (54%), Gaps = 7/475 (1%)

Query: 13  SLMALAILSAGGVGYLVGKQQTPHSASTAEPERA----VLYWYDPMVPDKRFDKPGKSPF 68
           SL AL  L  G  GY +  Q   H A   EP  A    VLYWYDPMVP  RFDKPGKSPF
Sbjct: 10  SLAALTALLGGAAGYWLASQNE-HGAEHLEPAVASQAQVLYWYDPMVPQHRFDKPGKSPF 68

Query: 69  MDMELVPRYADDVQEDGGVIVSARQQQNLGVRTARAEMRELTDRTTGYGTVALNERGLHT 128
           MDM+LVPRYA +  +   + + A   QNLGVR A     +L  +    G +  N R +  
Sbjct: 69  MDMDLVPRYAGEDGDAAAINIDAGITQNLGVRLASVTRGQLASQIEAVGVLEYNARDVAV 128

Query: 129 LVAPSGGIVEKLTVNALQQQVKKGETLATLWNPTWAAAQREYLVVRQLGDDTLTQSARQR 188
           +   +GG VE++  +A    + KG  LA L  P W+AAQ EYL +R++G+  L ++ARQR
Sbjct: 129 VQVRAGGFVERVYHHAPGDLLDKGTPLADLLIPEWSAAQEEYLALRRIGEPALLEAARQR 188

Query: 189 LALLFMPEAIIRQVERSGKPQDRIAITAPEDGYVNKLEVRQGMQLSPAQPLFELASLNPV 248
           L L  MP A I Q+ER+GK    I I+ P  G + +L+VR+GM L+   PL  +  L+ V
Sbjct: 189 LRLAGMPAATISQLERTGKVSASITISTPIAGVLQELDVREGMSLAAGAPLARINGLDSV 248

Query: 249 WVDVDYPEAQAAQLTIGSDISATSSAWPGKTFHGKVSELLPMLDSTTRTLKARVVLDNPQ 308
           W++V  PEAQ+  + +G   +A   A PG+   G ++ +LP  ++ +RTL+ RV L NPQ
Sbjct: 249 WLEVAVPEAQSTGIRVGQRATARLPAMPGERIEGTITAVLPEANAASRTLRVRVQLPNPQ 308

Query: 309 QQLKPGMYLTVQLSHTQAQPRLAIPQEALLVSGSQNRVLLSDGNGHFTPRNVTVGASLGD 368
             L+PG+     L        L IP EA++ +G ++ V+L++  G + P  V  G   G+
Sbjct: 309 GLLRPGLTAQATLKGADDTSVLLIPSEAVIRTGRRSLVMLAEAGGRYRPVEVETGRDSGN 368

Query: 369 WVEILDGLKAGDNVVTSGQFLIDSEASLRS--ALPQFDAETSANPATPTAPAGYRTQGVI 426
              I+ GL+ G  VV SGQFL+DSEASLR   A P       A+     APA + ++G +
Sbjct: 369 QTAIVAGLEEGQQVVASGQFLLDSEASLRGIVASPATGDTGHAHDHAQIAPALHESEGRV 428

Query: 427 RAINGKQATIEHEAVPALNWSPMTMDFTLPSSGLPQGVGIGSTVSFQFSMDDSGI 481
            A++  +  I H     L    MTM F +  S L +GV     + F     D G+
Sbjct: 429 LALSENRLKIAHGPFHTLGMPGMTMSFAVADSELLRGVQAQDRIRFAVRETDQGL 483