Pairwise Alignments

Query, 500 a.a., efflux RND transporter periplasmic adaptor subunit from Pectobacterium carotovorum WPP14

Subject, 430 a.a., copper/silver efflux system membrane fusion protein CusB (RefSeq) from Shewanella sp. ANA-3

 Score =  251 bits (640), Expect = 5e-71
 Identities = 153/414 (36%), Positives = 226/414 (54%), Gaps = 8/414 (1%)

Query: 10  LMFSLMALAILSAGGVGYLVGKQQTPHSASTAEPERAVLYWYDPMVPDKRFDKPGKSPFM 69
           ++ SL+A  ++S     Y+   Q+T  +   A PE+ VL+WYDPM PD +FDKPGKSPFM
Sbjct: 12  IISSLLAGGLISVTAWQYVNSSQKTVQTEQKA-PEKKVLFWYDPMKPDTKFDKPGKSPFM 70

Query: 70  DMELVPRYADDV--QEDGGVIVSARQQQNLGVRTARAEMRELTDRTTGYGTVALNERGLH 127
           DM+LVP+YAD+   + +GG+ +   Q QNLG++T +     L    T    V+ NE    
Sbjct: 71  DMDLVPKYADESGDKSNGGIRIDPTQVQNLGLKTQKVTRGMLNYSQTIPANVSYNEYQFV 130

Query: 128 TLVAPSGGIVEKLTVNALQQQVKKGETLATLWNPTWAAAQREYLVVRQLGDD-TLTQSAR 186
            + A S G VEK+        VKKG  L  +  P W  AQ E+L++   G   T  +   
Sbjct: 131 IVQARSDGFVEKVYPLTTGDHVKKGTPLIDITIPEWVEAQSEFLLLSGTGGTPTQIKGVL 190

Query: 187 QRLALLFMPEAIIRQVERSGKPQDRIAITAPEDGYVNKLEVRQGMQLSPAQPLFELASLN 246
           +RL L  MPE  I+++  +   Q R  I AP DG +   ++R GM +S  + + ++  ++
Sbjct: 191 ERLRLAGMPEEDIQRLRSTRTIQTRFTIKAPIDGVITAFDLRTGMNISKDKVVAQIQGMD 250

Query: 247 PVWVDVDYPEAQAAQLTIGSDISATSSAWPGKTFHGKVSELLPMLDSTTRTLKARVVLDN 306
           PVW+    PE+ A  L   S    +  A+P KTFH +   +LP +D TTRTL+ R+ + N
Sbjct: 251 PVWISAAVPESIAYLLKDTSQFEISVPAYPDKTFHVEKWNILPSVDQTTRTLQVRLQVSN 310

Query: 307 PQQQLKPGMYLTVQLSHTQAQPRLAIPQEALLVSGSQNRVLLSDGNGHFTPRNVTVGASL 366
             + LKPGM   ++L +T++Q  L IP +A++ +G + RV+  D  G F P+ + V    
Sbjct: 311 KDEFLKPGMNAYLKL-NTKSQEMLLIPSQAVIDTGKEQRVITVDDEGKFVPKQIHVLHES 369

Query: 367 GDWVEILDGLKAGDNVVTSGQFLIDSEASLRSALPQF---DAETSANPATPTAP 417
                I  GL  GD VV SG FLIDSEA++  AL +    +   S+ PA    P
Sbjct: 370 QQQSGIGSGLNEGDTVVVSGLFLIDSEANITGALERMRHPEKTESSMPAMSDQP 423