Pairwise Alignments

Query, 281 a.a., deoxyribonuclease IV from Pectobacterium carotovorum WPP14

Subject, 282 a.a., endonuclease IV (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  164 bits (416), Expect = 2e-45
 Identities = 102/268 (38%), Positives = 135/268 (50%), Gaps = 6/268 (2%)

Query: 1   MKYIGAHVSASGGVDQAVIRAHEIQATAFALFTKNQRQWQAAPLSTEVIDRFKTACEQYA 60
           M   GAH+SA+GGV  A+    EI      LFT NQRQW     S   ++ F     + A
Sbjct: 1   MPLFGAHMSAAGGVSNAIRDIVEIGGEVLQLFTANQRQWTPKAPSEADVEAFG---RRRA 57

Query: 61  YTPAQILPHDSYLINLGHPDAEALEKSRIAFIDEMSRCQQLGLSLLNFHPGSHLKQIEEA 120
                +  H SYLIN+ + D  A  K+  A + E  RC  LG+  +  HPG+HL      
Sbjct: 58  AFGGPVFSHASYLINIANGDGAASAKAVEALVREFERCTALGVDAVVLHPGAHLGAGRGT 117

Query: 121 DCLARIAESINIALAETDGVTAVI--ENTAGQGSNLGFRFEHLAAIIDGVEDKSRVGVCI 178
             L R A +I+       G T V+  ENTAGQG+ LG     LA IID     S++GVC+
Sbjct: 118 GIL-RAARNIDEVFDRCGGQTPVLLLENTAGQGTCLGGDLNDLAEIIDASRHASQLGVCL 176

Query: 179 DTCHAFAGGYDLRTEADCEATFAEFDRIVGFRYLRGMHLNDAKSAFGSRVDRHHSLGEGN 238
           DT HAF  GY L T+        + +   G   +R  H+ND+    GSR DRH  +GEG 
Sbjct: 177 DTAHAFGAGYALHTDEGYRRCMEDIEHGPGLAAVRLFHVNDSLVPCGSRKDRHTHIGEGQ 236

Query: 239 IGKTAFSYIMKDARFDSIPMILETINPD 266
           +G+ AF  ++ D  F   PM+LET   D
Sbjct: 237 LGEAAFVRLLNDPVFAMHPMVLETPKED 264