Pairwise Alignments

Query, 249 a.a., LytTR family DNA-binding domain-containing protein from Pectobacterium carotovorum WPP14

Subject, 237 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  101 bits (252), Expect = 1e-26
 Identities = 67/248 (27%), Positives = 119/248 (47%), Gaps = 16/248 (6%)

Query: 1   MKAIIVEDEFLAQQELSYLIKQHSGITIAATFDDGLDVLKYLQHNDVDAIFLDINIPSLD 60
           + A++++DE  A++EL+ L+ +   I +     + ++ LK +     D +FLDI +P + 
Sbjct: 2   LSALLIDDERFAREELAELLAESGQIEVIGQASNAIEGLKKINQLKPDVVFLDIQMPQIS 61

Query: 61  GVWLAQNISKFAHKPYIIFITAYKEHAVEAFEVEAFDYILKPYHESRIITMLRKLETTWQ 120
           G+ L   +      P ++F+TAY ++A++AFE  AFDY+LKP    R+   +++L    +
Sbjct: 62  GIELLSMLDPET-MPEVVFVTAYDQYALQAFEDNAFDYLLKPVDTERLAKTVQRLLRQHK 120

Query: 121 QRQMVPAVETGTQAGAPRGAQQTINL-MKDERIIVTDINNIYYAAAQEKVTLVYTRREEF 179
           +    P  +         G  + + L + +     +DI+ +    AQ+K T   T     
Sbjct: 121 KSDYSPLTQPSLDQIPCTGLNRIVLLPINEVEFAYSDISGVNVQTAQQKATSQLT----- 175

Query: 180 IMPMNITEFCSRLPEDYFFRCHRSYCVNLTKIREIVPWFNNTYILRLNDLDFEVPVSRSK 239
              + + E  + L      RCHR Y VNL  IREI     N     +     +VPVSR  
Sbjct: 176 ---LKVLEEKTAL-----VRCHRQYLVNLKAIREI-KLLENGLAEMITHAGHKVPVSRRY 226

Query: 240 IKAFRSLM 247
           +K  + ++
Sbjct: 227 LKELKEML 234