Pairwise Alignments

Query, 249 a.a., LytTR family DNA-binding domain-containing protein from Pectobacterium carotovorum WPP14

Subject, 260 a.a., two component transcriptional regulator, LytTR family (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  104 bits (260), Expect = 2e-27
 Identities = 78/257 (30%), Positives = 126/257 (49%), Gaps = 15/257 (5%)

Query: 1   MKAIIVEDEFLAQQELSYLIKQHSGITIAATFDDGLDVLKYLQHNDVDAIFLDINIPSLD 60
           ++A+IV+DE  A+ EL+YL+  +  +  AA      + L+ L     D +F DI +P  D
Sbjct: 3   IRALIVDDERPARDELAYLLSAYPDVE-AAEAASASEALRKLAEEKFDLVFQDIQMPGHD 61

Query: 61  GVWLAQNISKFAHK----PYIIFITAYKEHAVEAFEVEAFDYILKPYHESRIITMLRKLE 116
           G  + +     A      P+ +F+TA+ EHA+ AFE  A DY+LKP   +R+   L ++ 
Sbjct: 62  GFHVQREAQAQAQPGEAGPFFVFVTAFDEHAIRAFEENALDYLLKPVVPARLARCLDRVR 121

Query: 117 ---TTWQQRQMVPAVETGTQAGAPRGAQQTINLMKDERIIVTDINNIYYAAAQEKVTLVY 173
                   R +  A+ T   A       + + + +  RI +    ++    A+EK  +  
Sbjct: 122 GRLAADGTRPLQNAMATLLGALGHSKPVERLAIEQGGRISLIPTRDVVMIEAEEKRIVAV 181

Query: 174 TRREEFIMPMNITEFCSRLPEDY----FFRCHRSYCVNLTKIREIVPWFNNTYILRLNDL 229
           T  +E  +P +     +R  E      FFR +R+  VNL +I E  PW N  Y L +ND 
Sbjct: 182 T--DEGRLPCHNMNTLARAEERLAGLPFFRVNRAVLVNLERIAEFSPWINGKYHLVMNDP 239

Query: 230 D-FEVPVSRSKIKAFRS 245
           D  EV VSR++ + FR+
Sbjct: 240 DRTEVTVSRNRARDFRA 256