Pairwise Alignments

Query, 388 a.a., tyrosine-type recombinase/integrase from Pectobacterium carotovorum WPP14

Subject, 391 a.a., Integrase from Pseudomonas stutzeri RCH2

 Score =  256 bits (653), Expect = 1e-72
 Identities = 146/387 (37%), Positives = 217/387 (56%), Gaps = 2/387 (0%)

Query: 2   LTDTQCRTAKLKEKLYRLNDFNGLYLEVKPNGKKAWRYRFKLNGKSSMFALGEYPTVKLA 61
           LT  Q ++A  ++  Y L D  GL+L ++  G K+WR+RF+L+GK S  +LG    V LA
Sbjct: 3   LTALQVKSAAPRKSDYGLADGGGLFLWIRAAGGKSWRFRFRLDGKQSHISLGTIDKVTLA 62

Query: 62  EAREKCEQARKQVADGVSPTQARQLDKIRKVNDASNTFELIAKEWLQMKD--WADITKTR 119
           +AR+    AR+ VA G  P   R++ + +     +NTF+ +A EW Q K   W+      
Sbjct: 63  QARQLASDARQLVAQGRHPGLERKVMRAQAAMSRANTFKSLALEWHQHKAPRWSVGYAGD 122

Query: 120 RLDMLERIVFPAIGKLPIREITPHHILKILQETAKRGAPTVAAEARRTISSVFELAVATL 179
            ++  E  VFP +G LP+ +I P   L++ +    RGA     + R+    V+  A+AT 
Sbjct: 123 VVEAFELDVFPQVGSLPLTDIKPMQWLQVFRRIESRGALEKLRKVRQRCQEVYRFAIATG 182

Query: 180 RADSDPVWPVRKALPANKTQHKQALNPQQIGKLLSCFDNSRGSYQVNYCMWLMWWTLARP 239
           RA+ +P+  +  AL    ++H   L   +I  L+       G   V     L+  T  R 
Sbjct: 183 RAEYNPIADIGGALQTPTSRHYPFLPIAEIPALIRSIQACPGHDVVKIATRLLILTGVRT 242

Query: 240 AEVTEAEWAEFDLDNGLWTIPATRMKARREHVIPLPSQAVSMLRTLQGLTGHRQHIFPGR 299
           AE+    W+EFDLD  LW IPA RMK RR H++PL  QAV++LR L+ +TG     FPGR
Sbjct: 243 AELRGVPWSEFDLDKALWLIPAARMKMRRAHLVPLSQQAVAVLRELERITGGYTLAFPGR 302

Query: 300 DNPRGPMTSHSLRQLLKSLGWSGTYSPHATRTTGSTRLNEMGYRPDAIEAQLAHADTNNV 359
           ++P  PM+  ++ QLLK  G+ G  + H  R T ST L+E GY  + +E QLAH D N++
Sbjct: 303 NDPAKPMSEAAINQLLKRSGYDGRATGHGFRHTMSTTLHEQGYPSEWVETQLAHVDKNSI 362

Query: 360 RRTYNHATYLDERKVMMQEWADKLEML 386
           R TYNHA YL+ R+ M+Q +A+ ++ L
Sbjct: 363 RGTYNHAQYLEGRREMLQWYANHVDEL 389