Pairwise Alignments

Query, 388 a.a., tyrosine-type recombinase/integrase from Pectobacterium carotovorum WPP14

Subject, 408 a.a., phage integrase family protein (RefSeq) from Shewanella sp. ANA-3

 Score =  233 bits (595), Expect = 6e-66
 Identities = 137/390 (35%), Positives = 203/390 (52%), Gaps = 10/390 (2%)

Query: 2   LTDTQCRTAKLKEKLYRLNDFNGLYLEVKPNGKKAW--RYRFKLNGKSSMFALGEYPTVK 59
           L DT+ R AK +EK Y L+D NGL L V+P G K W   Y    + K +   LG YP + 
Sbjct: 8   LNDTEVRQAKPREKEYNLSDGNGLMLRVRPIGSKTWLLNYSRPTSRKRANLTLGTYPELT 67

Query: 60  LAEAREKCEQARKQVADGVSPTQARQLDKIRKVNDASNTFELIAKEWLQMKDWADITKTR 119
           LA+AR K   ARK +A  + P + R+  +        +TFE +A +W  +K   +IT+  
Sbjct: 68  LADARRKALDARKLIAQDIDPQEHREGQRQALAAIHEHTFENVATQWFDIKK-TEITENH 126

Query: 120 RLDMLERI---VFPAIGKLPIREITPHHILKILQETAKRGAPTVAAEARRTISSVFELAV 176
                      V P IG  PI +IT   +++I +    +G+        + ++ V   AV
Sbjct: 127 AASTWRSFKLHVLPYIGSTPISQITAPMVIEIFRPIEAKGSLETVKRLTQRLNEVMTYAV 186

Query: 177 ATLRADSDPVWPVRKALPANKTQHKQALNPQQIGKLLSCFDNSRGSYQVNYCMWLMWW-- 234
            T    ++P+  ++ A    K Q   A+ P ++ +LLS    SR S +    + + W   
Sbjct: 187 NTGLIHANPLSGIKAAFKKPKKQKMAAMAPYELPELLSTL--SRASIKRVTRLLIEWQLH 244

Query: 235 TLARPAEVTEAEWAEFDLDNGLWTIPATRMKARREHVIPLPSQAVSMLRTLQGLTGHRQH 294
           T+ RP E   A W EF+ D+ LWTIPA RMK +REHVIPL    + +L+ L+ ++GHR++
Sbjct: 245 TMTRPNEAAGARWDEFNFDDRLWTIPAERMKMKREHVIPLSDACMLILQELKSISGHREY 304

Query: 295 IFPGRDNPRGPMTSHSLRQLLKSLGWSGTYSPHATRTTGSTRLNEMGYRPDAIEAQLAHA 354
           +FP   NP+      +    LK +G     + H  R   ST LNE G+  D +EA LAH 
Sbjct: 305 LFPADRNPKTHSNVQTANAALKRMGLQDRTTAHGLRALASTTLNEQGFDWDVVEAALAHT 364

Query: 355 DTNNVRRTYNHATYLDERKVMMQEWADKLE 384
           D N VR  YN ATYL+ R+ MM+ W+  ++
Sbjct: 365 DKNQVRSAYNRATYLERRREMMEWWSKSIK 394