Pairwise Alignments

Query, 558 a.a., glycoside hydrolase family 43 protein from Pectobacterium carotovorum WPP14

Subject, 326 a.a., arabinan endo-1,5-alpha-L-arabinosidase from Pedobacter sp. GW460-11-11-14-LB5

 Score = 55.5 bits (132), Expect = 3e-12
 Identities = 54/235 (22%), Positives = 102/235 (43%), Gaps = 29/235 (12%)

Query: 4   NPIFKGFNPDPSICRRNNDYYV---AVSSFEWFPGMPIYHSTDLKNWTLHTHVLRDEKKV 60
           NPIF+G+  DP     NN Y+V     + ++    +  + S DL  W  H H+L D   V
Sbjct: 29  NPIFQGWYADPDAAIFNNKYWVYPTYSARYKEQVFLDAFSSDDLVKWKKHPHIL-DTAAV 87

Query: 61  DLTRLPSAKGIWAPCLTWCEEKQLFYVIYGVMNSMHGRYFDVDNYLITAPEITGPWSEPV 120
                   K +WAP +   ++K  +Y+ +G  +    +        + A +  GP+ + +
Sbjct: 88  KWAN----KAMWAPAIVQKDKK--YYLFFGANDIQSDKEIGGIGVAV-ADKPEGPYKDHI 140

Query: 121 ------YLHSGG--YDASILHDEDGRKWIVAVDWETRDGHNGAISLVEYSPETRSVIGYP 172
                   H+G    D  +  D+DG+ +++   W+         ++ + + +    + + 
Sbjct: 141 GKPLVDKFHNGAQPIDQFVFKDKDGQYYLIYGGWK-------HCNIAKLNQDFTGFLPFE 193

Query: 173 K-RIWSGMTGIG-AEGPHLTKRGRYYYLMCAEGG-TGYGHCVTMARAEQVWGPYE 224
               +  +T     EGP++  R   YY M +EGG TG  + V  A  +  +GP++
Sbjct: 194 DGTTFKEITPDNYVEGPYMFIRNGKYYFMWSEGGWTGPDYSVAYAVGDSPFGPFK 248