Pairwise Alignments

Query, 314 a.a., sugar-binding transcriptional regulator from Pectobacterium carotovorum WPP14

Subject, 319 a.a., transcriptional regulator, DeoR family (RefSeq) from Dinoroseobacter shibae DFL-12

 Score = 97.1 bits (240), Expect = 5e-25
 Identities = 83/318 (26%), Positives = 146/318 (45%), Gaps = 9/318 (2%)

Query: 1   MSKQDEQRLLVKIATLYYSEGMKQAEIAASLHLSQSFVSRAITRCVKEGVVKISVIQPPN 60
           M+ +D+  L V+ A LYY +G+ Q EIA  + +S++ V   +      G V++ +    +
Sbjct: 3   MASRDDA-LFVEAAWLYYHDGLNQTEIAERMRISRASVVNYLNEARTRGWVRVHL--DSD 59

Query: 61  MFMG--LEAAIQKRYGIDQAIVV--DVADNATLAQIKQAIGSAAAHYVQTSIRPDDLVGI 116
           +F G  L A +   +G+  A+VV  D  D    A     +   AA ++   + P D +G+
Sbjct: 60  VFRGHRLAAELCALFGLTDALVVPDDPLDPEGAAASVARVTRTAADWLPRLLEPGDRLGV 119

Query: 117 SSWSSTLRAMVDSLHPQSVKAQGVIQLLGGVGPNGNVQATILTQTLANQLSCPAYLLPAQ 176
           S W +T+  M   +    V    VIQLLG         A   T  LA +L      L   
Sbjct: 120 S-WGATIYQMAQQVPNAPVPDLRVIQLLGSRPAALGFAAEACTAMLAQRLGGECINLHVP 178

Query: 177 SIERSVEDRARLVTSDEVSSVVDKFSEVSLALVGIGVLEPSQLLKNSGNYYHEAMLQQLA 236
            +  +   R  L     V   ++  +  +  ++  G  +    +  SG    +++    A
Sbjct: 179 LVLSNKALRDALCDEPVVREQLEALASCNKTVLACGTCDADAHVVRSGIVTSDSISDYRA 238

Query: 237 ERGAVGDLCLHYYNAEGEPVLQDDEDPVIGMALPQLRQCPRVVALAGGIEKSAAIRGALT 296
            +GAVG +C    + +G+PV+ + ED +IG+ L Q+R     + +A G  ++A  + A+ 
Sbjct: 239 -KGAVGVICGRLIDVKGQPVVAEVEDRMIGVTLDQMRGKDMALLVAAGPGRAAPAKAAIK 297

Query: 297 GHYVDVLITDRLTAETLI 314
           G +V  L+T +  AE L+
Sbjct: 298 GGFVTHLVTSKRIAEDLL 315