Pairwise Alignments

Query, 189 a.a., cytochrome c nitrite reductase pentaheme subunit from Pectobacterium carotovorum WPP14

Subject, 318 a.a., decaheme cytochrome c MtrD (RefSeq) from Shewanella amazonensis SB2B

 Score = 67.8 bits (164), Expect = 2e-16
 Identities = 42/144 (29%), Positives = 68/144 (47%), Gaps = 16/144 (11%)

Query: 47  EACLQCHKPEE------DGMQGKHASAVNPHNQKQLTCTNCHGKPSPMHREGVRDVMRFN 100
           ++CL CHK         D + G   S+ +P     L C  CHG     ++ G   ++ F 
Sbjct: 57  DSCLMCHKKSATVMALFDNVHGSTHSSASP--MADLQCEACHGPMGNHNKGGKEPMITFG 114

Query: 101 FPM-YKVEEQNSVCMSCHTPEQLQKSFWPHDVH-VAKVACASCHQLHPTQDSMQTLNDKS 158
                  ++QNSVC+SCH  ++  +  W    H  A + CASCH +H  +D +Q     +
Sbjct: 115 KDAPVAADKQNSVCLSCHQDDK--RMAWEGSHHNSADIPCASCHLIHTAKDPVQ--QRAT 170

Query: 159 RIKLCVDCHSDQRNNPDFNPASVH 182
            +++C  CH +Q+   D +  S H
Sbjct: 171 EVEVCTACHLEQK--ADIHKRSSH 192



 Score = 45.8 bits (107), Expect = 8e-10
 Identities = 32/125 (25%), Positives = 53/125 (42%), Gaps = 25/125 (20%)

Query: 47  EACLQCHKPEEDGMQGKHASAVNPHNQKQLTCTNCHGKPSPMHREGVRDVMRFNFPMYKV 106
           E C  CH  ++  +   H  + +P    Q+ C++CH     +    ++ +          
Sbjct: 173 EVCTACHLEQKADI---HKRSSHPVENGQMVCSDCHNPHGSLGESSLKQM---------- 219

Query: 107 EEQNSVCMSCHTPEQLQKSFWPHDVHVAKVA--CASCHQLH-PTQDSMQTLNDKSRIKLC 163
              N  C +CH  ++  K  W H    A V   CASCHQ+H    ++M T+      +LC
Sbjct: 220 -SINENCYACHAEKRGPK-LWEH----APVTDNCASCHQVHGSVNEAMLTIKAP---QLC 270

Query: 164 VDCHS 168
             CH+
Sbjct: 271 QQCHA 275