Pairwise Alignments

Query, 172 a.a., bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase from Pectobacterium carotovorum WPP14

Subject, 1899 a.a., omega-3 polyunsaturated fatty acid synthase PfaC (RefSeq) from Shewanella amazonensis SB2B

 Score = 73.6 bits (179), Expect = 2e-17
 Identities = 53/171 (30%), Positives = 83/171 (48%), Gaps = 15/171 (8%)

Query: 13   LLASSRGELFGPNG------PQL--PAPNMLMMDRVVKMTEDGGKYGKGYVEAELDITPD 64
            LL++     FGP+       P L   +   LM++ V K+   GG +G G +E    + PD
Sbjct: 1253 LLSADVAGCFGPSHDLGFHQPSLCFASEKFLMIEEVSKVDVQGGAWGLGLIEGHKQLEPD 1312

Query: 65   LWFFDCHFIGDPVMPGCLGLDAMWQLVGFYLGWLG-----GEGKGRAL--GVGEVKFTGQ 117
             W+F CHF  D VM G L  +   QL+ FY+  LG       G+ + L     +V+  GQ
Sbjct: 1313 HWYFPCHFKDDQVMAGSLMAEGCGQLLQFYMLHLGLHKLTQNGRFQPLKDAPQKVRCRGQ 1372

Query: 118  VLPTAKKVTYRIHFKRVINRRLVMGIADGEVLVDGQQIYTADELKVGLFKD 168
            VLP + ++TYR+    +         A+ E+++DG+ +     L V L +D
Sbjct: 1373 VLPQSNRLTYRMEVTDIGLTPSPWAKANIEIILDGKVVVDFQNLGVMLKED 1423



 Score = 67.8 bits (164), Expect = 1e-15
 Identities = 47/145 (32%), Positives = 72/145 (49%), Gaps = 8/145 (5%)

Query: 28   QLPAPNMLMMDRVVKMTEDGGKYGKGYVEAELDITPDLWFFDCHFIGDPVMPGCLGLDAM 87
            +LP   +  +D+V  +   GGK G GYV  E +I P  WFF  HF  DPVMPG LG++A+
Sbjct: 1753 RLPGGRLNFVDKV-DIVRAGGKAGLGYVYGERNIDPSDWFFRFHFHQDPVMPGSLGVEAI 1811

Query: 88   WQLVGFYL--GWLGGEGK----GRALGVGEVKFTGQVLPTAKKVTYRIHFKRVINRR-LV 140
             +L+  +     LG E         L   + K+ GQ+ P  K+++  +H   +      V
Sbjct: 1812 IELLSSFALDSGLGNEFANPRFNHCLSRVKWKYRGQISPLNKQMSLELHVTAIERETGRV 1871

Query: 141  MGIADGEVLVDGQQIYTADELKVGL 165
               AD  +  DG +IY   +L + +
Sbjct: 1872 TLKADAWLAKDGLRIYEISDLALAI 1896



 Score = 25.0 bits (53), Expect = 0.007
 Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 12/65 (18%)

Query: 12   DLLASSRGEL---FGPNGP---------QLPAPNMLMMDRVVKMTEDGGKYGKGYVEAEL 59
            DL+  + G++   FGP+           +LP  + L++ RV K+    G+Y    +  E 
Sbjct: 1037 DLVQYAEGDIAPVFGPDYAIIDSYKRRVRLPTTDYLLVSRVTKLDAKLGEYKPSTMTTEY 1096

Query: 60   DITPD 64
            DI  D
Sbjct: 1097 DIPLD 1101