Pairwise Alignments

Query, 324 a.a., NADH-quinone oxidoreductase subunit NuoH from Pectobacterium carotovorum WPP14

Subject, 332 a.a., respiratory-chain NADH dehydrogenase subunit 1 (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  106 bits (264), Expect = 9e-28
 Identities = 91/337 (27%), Positives = 149/337 (44%), Gaps = 34/337 (10%)

Query: 1   MSWLTPELIEILISVGKAIVILLV------VVTCGAFMSMGERRLLGLFQGRYGPNRVGW 54
           MS+ T    ++L   G  ++ LLV       +  G F+   +RR+    Q R GP  +  
Sbjct: 1   MSYATELFTQLLTQTGLGLLGLLVFPGGLFALAVGLFLKGLDRRIEARLQRRVGPPLI-- 58

Query: 55  GGSLQLVADMIKMFFKEDWVPNFTDKVIFTLAPMIAFTSMLIAFAIVPITPTWGVADLNI 114
               Q   D+ K+F KE  +P   ++  F LAP++  T M +  A++P+    G      
Sbjct: 59  ----QPYLDIAKLFTKETVMPASANRAAFLLAPLLGLTGMAVCAALLPVPGVSGGLPAMG 114

Query: 115 GILFFLMMAGLAVYAVLFAGWASNNKYSLLGAVRASAQTVSYEVFIGLSLMGVVAQAG-- 172
            +L    +  L   A++  G AS++ +  +G  R      +YE+ +   ++ V  + G  
Sbjct: 115 DLLVIFYLLPLPAIALMVGGSASSSPFGAMGFSREMTLMFAYEMPLLAVMLAVAMKVGMA 174

Query: 173 -----SFNMRDIVDSQEHLWN--------VIPQFFGFITFAIAGVAVCHRHPFDQPEAEQ 219
                 F++ +IVD Q  L N        +IP    ++ F    +      PFD PEAE 
Sbjct: 175 TGGGAEFSLANIVDYQ--LANGQLALDPVMIPALLAYLLFLPGTMGTV---PFDVPEAET 229

Query: 220 ELADGYHIEYSGMKFGLFFVGEYIGIVTVSALMVTLFFGGW-HGPILPPFVWFALKTGFF 278
           E+ +G  +EYSG     F +   +  V V  L V LF  G   G I+    WF LK    
Sbjct: 230 EIIEGPLLEYSGPALAFFHIASALKTVVVLGLGVALFLPGTVPGGIVANIPWFVLKCAAL 289

Query: 279 MMMFI-LIRASLPRPRYDQVMSFGWKVCLPITLLNLL 314
           M + + L++++  R R DQ  +F  K    + L +L+
Sbjct: 290 MAVSLTLVKSATGRFRVDQAFTFYLKYPSVLALASLV 326