Pairwise Alignments

Query, 324 a.a., NADH-quinone oxidoreductase subunit NuoH from Pectobacterium carotovorum WPP14

Subject, 358 a.a., NADH dehydrogenase I, chain H (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  250 bits (638), Expect = 4e-71
 Identities = 124/327 (37%), Positives = 190/327 (58%), Gaps = 19/327 (5%)

Query: 13  ISVGKAIVILLVVVTCGAFMSMGERRLLGLFQGRYGPNRVGWGGSLQLVADMIKMFFKED 72
           I+VG  IV L  ++     +   ER++ G FQ R GPNRVG  GS+Q++ D++KM  KE 
Sbjct: 30  IAVGVCIVALYAILAI--VLIYMERKVCGFFQCRLGPNRVGKWGSIQVICDVLKMLTKEI 87

Query: 73  WVPNFTDKVIFTLAPMIAFTSMLIAFAIVPITPTWGVADLNIGILFFLMMAGLAVYAVLF 132
           + P   D+ ++ LAP +   +  + FA +P      + + N+G+ F L  + + V  +L 
Sbjct: 88  FTPKDADRFLYNLAPFMVIIASFLTFACIPFNKGAEILNFNVGVFFLLAASSIGVVGILL 147

Query: 133 AGWASNNKYSLLGAVRASAQTVSYEVFIGLSLMGVVAQAGSFNMRDIVDSQEHLWNV--- 189
           AGW SNNK+SL+GA+R+ AQ +SYE+ +G+S+M +V   G+    +IV+ Q   W +   
Sbjct: 148 AGWGSNNKFSLIGAMRSGAQIISYELSVGMSIMTMVVLMGTMQFSEIVEGQADGWFIFKG 207

Query: 190 -IPQFFGFITFAIAGVAVCHRHPFDQPEAEQELADGYHIEYSGMKFGLFFVGEYIGIVTV 248
            IP    FI + IAG A C+R PFD PEAE EL  GYH EYSGM FG F++ EY+ +  V
Sbjct: 208 HIPAVIAFIIYLIAGNAECNRGPFDLPEAESELTAGYHTEYSGMHFGFFYLAEYLNLFIV 267

Query: 249 SALMVTLFFGGWHG-------------PILPPFVWFALKTGFFMMMFILIRASLPRPRYD 295
           +++  T+F GGW                 +P F+WF  K  F + + + I+ + PR R D
Sbjct: 268 ASVAATIFLGGWMPLHIIGLDGFNAVMDYIPGFIWFFAKAFFVVFLLMWIKWTFPRLRID 327

Query: 296 QVMSFGWKVCLPITLLNLLATAAVILY 322
           Q+++  WK  +PI+++NLL  A  + +
Sbjct: 328 QILNLEWKYLVPISMVNLLLMACCVAF 354