Pairwise Alignments

Query, 238 a.a., ABC transporter permease from Pectobacterium carotovorum WPP14

Subject, 239 a.a., Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine (NCBI) from Rhodospirillum rubrum S1H

 Score =  164 bits (415), Expect = 1e-45
 Identities = 94/211 (44%), Positives = 128/211 (60%)

Query: 22  GLAMTLWLLISSVVIGGLMALPLAIARVSPRRRFSFPVWLFTYVFRGTPLYVQLLVFYSG 81
           GL +TL L+  +V IG  +A+P A+ RV P        + F + FRGTPL +Q+ + Y G
Sbjct: 17  GLPVTLKLVTLAVAIGVFIAIPTALLRVHPSPLVRAFPYAFIFFFRGTPLLIQIALVYYG 76

Query: 82  VYSLEIVRGTDMLNAFFRSGLNCAILALALNTCAYTTEIFAGAIRAVPHGEIEAARAYGF 141
           + +L  +R  ++L    R    CA++A ALNT AY+ EI  GAI+A+P GE+EAARAYG 
Sbjct: 77  LSTLPWIRENEVLWPILREPFWCALIAFALNTGAYSAEILRGAIQAIPRGEVEAARAYGM 136

Query: 142 SRFKQYRCIILPGALRIALPAYSNEVILMLHSTALAFTVTVPDILKIARDINAATYQPFY 201
                 R IILP A +I LPAY NE+IL+L  +ALA ++T+ DI  +AR + A  Y P  
Sbjct: 137 RGLLIVRRIILPRAFQIGLPAYGNEIILILKGSALASSITLLDITGVARLLYARYYTPVE 196

Query: 202 AFGIAAVIYLAISFVLIGLFRKAERHWLRHL 232
           AF  A VIYL + ++L    R  ER   RHL
Sbjct: 197 AFVTAGVIYLILVYLLTRGLRLIERRLSRHL 227