Pairwise Alignments

Query, 216 a.a., type II secretion system minor pseudopilin GspJ from Pectobacterium carotovorum WPP14

Subject, 198 a.a., prepilin-type N-terminal cleavage/methylation domain-containing protein from Pseudomonas fluorescens SBW25-INTG

 Score = 52.8 bits (125), Expect = 5e-12
 Identities = 54/202 (26%), Positives = 92/202 (45%), Gaps = 16/202 (7%)

Query: 23  QQGFTLLEMILAIAIFAALSLSAFQVLNGVMRNDEISQRKAERLAEIQRAFSQMDNDFS- 81
           Q GFTL+E+++AI + A +SL A++ L+ V R D+  Q   E+   + RA +QM  D S 
Sbjct: 5   QHGFTLIEVMVAIMLMAVVSLIAWRGLDSVTRADQHLQASTEQTEVLLRALNQMQRDISL 64

Query: 82  ----QMIARGSRGSTSMFYAGRDQLKSDDWGVSFMRNGWQNPFGILPRSELQPVAYRLRE 137
               ++ A  +   T +         S  + +  +R+        +    LQ V + L+ 
Sbjct: 65  RASVELTAPDAPQDTGLAAITVRSSDSKGFRLDVIRS------APVAGDGLQRVRWWLKG 118

Query: 138 HTLERLTHVTPD--PIEGLDPGVKPLLTQVDGFRLRFFS-NKTWRDRWDNSTQLPQGIEV 194
             L R    T D  P+     G+  +LT V   ++R +  +K WR    N  + P G+E+
Sbjct: 119 DALYRAAAPTRDRYPLPAAKDGL-VVLTGVSDVQVRVWEPDKGWRQLSGNRREDPLGLEI 177

Query: 195 VLTLRDYGEMSRIFLITTGPVK 216
            L +R   +    +    GP+K
Sbjct: 178 SL-VRQTPQGVETYRQVVGPLK 198