Pairwise Alignments

Query, 398 a.a., NupC/NupG family nucleoside CNT transporter from Pectobacterium carotovorum WPP14

Subject, 419 a.a., nucleoside permease (cytidine, inosine, uridine, or thymidine) (from data) from Shewanella sp. ANA-3

 Score =  186 bits (471), Expect = 1e-51
 Identities = 119/422 (28%), Positives = 222/422 (52%), Gaps = 34/422 (8%)

Query: 5   HIAQFILALVVVAALALLVCRDRKSIRIRFIIQLLVIEILLAYFFLYSDIGLGAVKGVAA 64
           +I   ++ +VV+ A+  L+  ++K+I +R +   L I+     F LY  +G   +K V+ 
Sbjct: 2   NILMSLVGVVVLLAIGFLLSNNKKAINLRTVGGALAIQAAFGGFVLYVPVGKDILKSVSD 61

Query: 65  LFDKLLGFAGQGTDFVFGDMVNSEKNLISFFFKVLCPIVFISALIGILQHIKVLPIIIRA 124
               ++G+A  G  F+FGD+ N +   I F   VL  IVF S+LI +L ++ ++  IIR 
Sbjct: 62  AVSSVIGYAQNGIGFLFGDLANFKLGFI-FAVNVLPVIVFFSSLIAVLYYLGIMQWIIRI 120

Query: 125 IGTVLSKVNGMGKLESFNAVSSLILGQSENFIAYKDILGKMSEKRMYTMSATAMSTVSMS 184
           IG  L K  G  + ES +A +++ +GQ+E  +  +  +  M++  ++ +    +++++ S
Sbjct: 121 IGGGLQKALGTSRTESMSATANIFVGQTEAPLVVRPFIPTMTQSELFAIMVGGLASIAGS 180

Query: 185 IVGAYMSM-LDAKFVVAALILNMFSTFIVLSLINPYKVGEEQELQLGNLHE-------NQ 236
           ++  Y  M +  +++VAA  +      ++  L++P     E E+   ++ E         
Sbjct: 181 VLAGYAQMGVPIEYLVAASFMAAPGGLLMAKLMHP-----ETEVAKNDMDELPEDPDKPA 235

Query: 237 SFFEMLGEYILAGFKVAVIVAAMLIGFIALIAAVNAIFS------AIFGISFQEVLGYVF 290
           +  +       +G  +A+ V AML+ F+ LIA +N I         + G++ + +LGY+F
Sbjct: 236 NVLDAAAAGASSGMHLALNVGAMLLAFVGLIAMINGIIGGVGGWFGVEGLTLELILGYIF 295

Query: 291 YPFAWIMGIPSHEALQVGSIMATKLVSNEFVAMLE----LQKVAG----------ELSPR 336
            P A+++G+P +EAL  GS +  K+V NEFVA L     L+ +A            ++ R
Sbjct: 296 MPLAFLIGVPWNEALVAGSFIGQKIVVNEFVAYLNFAPYLKDIADGGMIVADTGLAMTDR 355

Query: 337 SVGILSVFLVSFANFSSIGIIAGAIKGLNEQQGNVVSRFGLKLVYGSTLVSILSAAIAGL 396
           +  I+S  L  FAN SSI I+ G +  +   + + +++ G++ V   +L +++SA IAGL
Sbjct: 356 TKAIISFALCGFANLSSIAILLGGLGAMAPNRRHDLAKLGIRAVIAGSLANLMSATIAGL 415

Query: 397 VL 398
            L
Sbjct: 416 FL 417