Pairwise Alignments

Query, 393 a.a., outer membrane protein assembly factor BamB from Pectobacterium carotovorum WPP14

Subject, 386 a.a., outer membrane protein assembly factor BamB from Vibrio cholerae E7946 ATCC 55056

 Score =  357 bits (917), Expect = e-103
 Identities = 176/391 (45%), Positives = 252/391 (64%), Gaps = 10/391 (2%)

Query: 2   QLRKTLLVGLVSVALLSGCSLFNSEEDVVTMSPLPQVENQFTPTKVWNSSVGSGIGEFYS 61
           +L   +LV    +ALL+GC+   SEE+ V M+PLP V+++FTP  +W++SVG G+G ++S
Sbjct: 3   KLFNQVLVAAGVLALLAGCA---SEEENVIMAPLPIVKSEFTPKTLWSASVGDGVGHYFS 59

Query: 62  NLHPAWQDNRVFAADRRGTVKAMDLSDGKEIWRADLSEKTNFFSRNNPALLSGGVTVSGN 121
            L P +  ++VF A R G VKA+D  +GK IW  DL  + +       A LSGG+T +  
Sbjct: 60  KLAPDYAYDKVFVASRDGVVKALDPQNGKVIWTTDLEIEGS-------ARLSGGITAAFG 112

Query: 122 HVYVGSERAQVYALNAEDGTPVWQTKVAGEALSRPVVSDGVVLIHTSNGMLQALNEADGA 181
            +++GSE   V AL+AE G P+W + + GE L+ P   + +V+++TS G L ALN+ DGA
Sbjct: 113 KLFIGSENGVVNALDAETGEPLWASAIEGEVLAAPAADNNIVIVNTSRGALIALNQEDGA 172

Query: 182 IKWSVNLDMPTLSLRGESAPTTAFGAAIVGGDNGRVNAVMINQGQLIWQQRISQPSGATE 241
            KW+++ ++P L+LRG+S PT   G    G  +GR+ A +  +GQLIWQQ + QP GATE
Sbjct: 173 QKWTISTEVPNLTLRGDSRPTAVAGGVFWGTPSGRLAAAIAERGQLIWQQPVGQPKGATE 232

Query: 242 IDRLNDVDTTPVVAGEVVYALGYNGNMTALDLRSGQVLWKRELGSVHDFIIDGDRIYLVD 301
           IDRL DVD +P+V G  ++ +G+NG + A+DLRSGQ +WKR   S  D   DG R+YLV 
Sbjct: 233 IDRLVDVDASPLVIGGTLFTVGFNGQLIAIDLRSGQPIWKRNYSSATDMATDGSRLYLVT 292

Query: 302 QDDRVVALNTNGGVSLWRQSDLLHRNLTAPALYNGYLVVGDTEGYLHWLNTADGRFVAQQ 361
             D +VA++T  G  LW  + L HR LTAP + + YLVVGD EGYLHW++   G F+AQQ
Sbjct: 293 DKDHLVAVDTRSGTELWSNTQLEHRLLTAPKMIDDYLVVGDAEGYLHWIDRNSGEFIAQQ 352

Query: 362 KVDSSGFLSKPVVASDKLLIQAKNGDVYAFT 392
            V+ SGF   P+  +D  +I  +NG +   T
Sbjct: 353 LVNDSGFAVGPLALNDGYVIVTRNGQIKKLT 383