Pairwise Alignments

Query, 373 a.a., flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase from Pectobacterium carotovorum WPP14

Subject, 384 a.a., 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (NCBI) from Rhodospirillum rubrum S1H

 Score =  389 bits (1000), Expect = e-113
 Identities = 207/361 (57%), Positives = 258/361 (71%), Gaps = 7/361 (1%)

Query: 7   ITRRKSTRIYVGKVPVGDGAPIAVQSMTNTRTTDVEATVNQIRALERVGVDIVRVSVPTM 66
           I+RR S +I VG V VG  AP++VQ+MTNT TTDV ATV QIR  +  G DIVRVS P  
Sbjct: 9   ISRRVSRKIRVGSVFVGGDAPVSVQTMTNTLTTDVAATVAQIRRAQEAGADIVRVSCPDE 68

Query: 67  DAAEAFKLIKQQVNVPLVADIHFDYRIALKVAEYGVDCLRINPGNIGNEERIRSVVDCAR 126
           ++  A K I  QV VP+VADIHF Y+ A++ AE G  CLRINPGNIG+ ER+R VV  A+
Sbjct: 69  ESTAALKAIISQVEVPIVADIHFHYKRAIEAAEAGAACLRINPGNIGSAERVREVVRAAK 128

Query: 127 YNNIPIRIGVNGGSLEKDLQEKYGEPTPEALLESAMRHVDILDRLNFDQFKVSVKASDVF 186
            +   +RIGVN GSLEK+L EKYGEP PEA++ESA+ H  IL+  +F +FK+SVKASD F
Sbjct: 129 DHGCSMRIGVNAGSLEKELLEKYGEPCPEAMVESALSHARILEDNDFTEFKISVKASDAF 188

Query: 187 LAVQSYRLLAARIDQPLHLGITEAGGARSGAVKSAIGLGLLLSEGIGDTLRISLAADPVE 246
           LAV +Y+ LA   D PLHLGITEAGG R G VKSAIG+G +L  GIGDT+R+SL+A P E
Sbjct: 189 LAVAAYKALAEACDYPLHLGITEAGGLRGGTVKSAIGIGSMLWAGIGDTIRVSLSAQPEE 248

Query: 247 EVKVGFDILKSLRIRARGINFIACPTCSRQEFDVIGTVNALEQRLEDLITPMDVSIIGCV 306
           EVKVGF+ILKSL +R RG+  ++CP+C+RQ FDVI TV  LE RL  + TP+ +SIIGCV
Sbjct: 249 EVKVGFEILKSLNLRHRGVRVVSCPSCARQGFDVIKTVEVLESRLSHIQTPITLSIIGCV 308

Query: 307 VNGPGEALVSTIGVTGGHN--KSG----FYEDGVRQRERFDNEQMIDQLEAKIRAKASMM 360
           VNGPGEA  + IG+TGG N  K G     Y  G+      +NE M+D L A +  KA+ +
Sbjct: 309 VNGPGEARETDIGLTGGGNLAKEGALNKVYVSGIPD-HTINNEAMVDHLVALVEKKAAEI 367

Query: 361 D 361
           +
Sbjct: 368 E 368