Pairwise Alignments

Query, 373 a.a., flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase from Pectobacterium carotovorum WPP14

Subject, 412 a.a., 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase from Dechlorosoma suillum PS

 Score =  179 bits (455), Expect = 9e-50
 Identities = 138/386 (35%), Positives = 203/386 (52%), Gaps = 60/386 (15%)

Query: 1   MHNAAPITRRKSTRIYVGKVPVGDGAPIAVQSMTNTRTTDVEATVNQIRALERVGVDIVR 60
           M +   I RR +  + VG V +G  AP+ VQSMTNT T D  AT  Q   L R G ++VR
Sbjct: 1   MSDPYSIPRRPTLGVKVGGVTIGGDAPVVVQSMTNTDTEDYLATALQTAELARAGSELVR 60

Query: 61  VSVPTMDAAEAFKLIKQQVN-----VPLVADIHFD-YRI-------ALKVAEYGVDCLRI 107
           ++V T +AA A   I++ ++     VPL+ D H++ +R+       A  +A+Y     RI
Sbjct: 61  ITVNTPEAAAAVPKIREHLDRLGLSVPLIGDFHYNGHRLLTDHPECAQALAKY-----RI 115

Query: 108 NPGNIGN----EERIRSVVDCARYNNIPIRIGVNGGSLEKDL-----QEKYGEPTPE--- 155
           NPGN+G+    +E+   +++ A   + P+RIGVN GSL++DL      E    P P+   
Sbjct: 116 NPGNVGHGKKRDEQFAQMIELACKYDKPVRIGVNWGSLDQDLLARIMDENAKRPEPKDAV 175

Query: 156 ---------ALLESAMRHVDILDRLNFDQFKVSVKASDVFLAVQSYRLLAARIDQPLHLG 206
                    + LESA + V+I   L  D   +S K S V   +  YR L+AR    LHLG
Sbjct: 176 QIMREAMVTSALESAEKAVEI--GLPADHIVLSCKVSGVQDLIAIYRELSARSRFALHLG 233

Query: 207 ITEAGGARSGAVKSAIGLGLLLSEGIGDTLRISLAADP----VEEVKVGFDILKSLRIRA 262
           +TEAG    G V S   +G+LL EGIGDT+R+SL  +P      EV V  ++L+++ +RA
Sbjct: 234 LTEAGMGSKGIVASTAAMGVLLQEGIGDTIRVSLTPEPGGKRTGEVIVAQEMLQTMGLRA 293

Query: 263 RGINFIACPTCSRQEF----DVIGTVNAL------EQRLE-DLITPMDVSIIGCVVNGPG 311
                 ACP C R       ++  T+         + R E D +  M ++++GCVVNGPG
Sbjct: 294 FTPMVAACPGCGRTTSTFFQELASTIQEYVRAQMPQWRTEYDGVENMTLAVMGCVVNGPG 353

Query: 312 EALVSTIGV----TGGHNKSGFYEDG 333
           E+  + IG+    TG    +  +EDG
Sbjct: 354 ESKHANIGISLPGTGEVPAAPVFEDG 379