Pairwise Alignments

Query, 373 a.a., flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase from Pectobacterium carotovorum WPP14

Subject, 363 a.a., 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  323 bits (828), Expect = 5e-93
 Identities = 165/327 (50%), Positives = 220/327 (67%)

Query: 7   ITRRKSTRIYVGKVPVGDGAPIAVQSMTNTRTTDVEATVNQIRALERVGVDIVRVSVPTM 66
           I RR++  + +G V +G   P+ VQSM NT T DV+ATV QIRAL  VG ++VR++V   
Sbjct: 3   IERRRTREVRIGSVRIGGDNPVVVQSMANTDTRDVDATVGQIRALAAVGCEVVRLAVLNE 62

Query: 67  DAAEAFKLIKQQVNVPLVADIHFDYRIALKVAEYGVDCLRINPGNIGNEERIRSVVDCAR 126
            AA A   I+    VPLVADIHFD+R+A+   E GVD LRINPGNIG E  +  VVD AR
Sbjct: 63  AAAAAIGPIRAASPVPLVADIHFDHRLAVAALEAGVDALRINPGNIGGEANVARVVDAAR 122

Query: 127 YNNIPIRIGVNGGSLEKDLQEKYGEPTPEALLESAMRHVDILDRLNFDQFKVSVKASDVF 186
                IR+GVN GS+EK L E++G PTPEA++ESA+ HV +L+   F   K+S+K+S V 
Sbjct: 123 ARGACIRVGVNSGSVEKHLLERFGGPTPEAMVESALGHVRMLEDRGFGDIKISLKSSSVL 182

Query: 187 LAVQSYRLLAARIDQPLHLGITEAGGARSGAVKSAIGLGLLLSEGIGDTLRISLAADPVE 246
             + +YR+LA R D PLH+G+TEAG    G+VKS++GLG+LL  GIGDTLR+SL +DPVE
Sbjct: 183 HTIDAYRVLAERCDYPLHIGVTEAGTMLRGSVKSSVGLGVLLWLGIGDTLRVSLTSDPVE 242

Query: 247 EVKVGFDILKSLRIRARGINFIACPTCSRQEFDVIGTVNALEQRLEDLITPMDVSIIGCV 306
           E+ V ++IL+SL +R RG   I+CPTC R E  +I     +E+RL        V+++GC 
Sbjct: 243 EIPVAWEILRSLGLRHRGPEIISCPTCGRTEIGLISLAQEVERRLAGETENFKVAVMGCA 302

Query: 307 VNGPGEALVSTIGVTGGHNKSGFYEDG 333
           VNGPGEA  + IG+ GG +K   +  G
Sbjct: 303 VNGPGEAREADIGIAGGRDKGIIFRKG 329