Pairwise Alignments

Query, 373 a.a., flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase from Pectobacterium carotovorum WPP14

Subject, 383 a.a., 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  413 bits (1062), Expect = e-120
 Identities = 208/355 (58%), Positives = 266/355 (74%)

Query: 7   ITRRKSTRIYVGKVPVGDGAPIAVQSMTNTRTTDVEATVNQIRALERVGVDIVRVSVPTM 66
           I RRKS +I+VG VP+G  APIAVQ+MTNT TTD+  T+ Q++A    G DIVRVSVP +
Sbjct: 12  IYRRKSRQIHVGPVPIGGDAPIAVQTMTNTLTTDIPGTIAQVQAAADAGADIVRVSVPDV 71

Query: 67  DAAEAFKLIKQQVNVPLVADIHFDYRIALKVAEYGVDCLRINPGNIGNEERIRSVVDCAR 126
           D++ A K I ++  VP+VADIHF Y+  ++ AE G  CLRINPGNIG+E+R++ V+  AR
Sbjct: 72  DSSRALKEIVRESPVPIVADIHFHYKRGIEAAEAGAACLRINPGNIGDEKRVKEVIKAAR 131

Query: 127 YNNIPIRIGVNGGSLEKDLQEKYGEPTPEALLESAMRHVDILDRLNFDQFKVSVKASDVF 186
            NN  +RIGVN GSLEK L +KY EP PEA++ESA+ H+ IL   +F +FK+S KASDVF
Sbjct: 132 DNNCSMRIGVNAGSLEKHLLDKYAEPCPEAMVESALDHIKILQDNDFHEFKISCKASDVF 191

Query: 187 LAVQSYRLLAARIDQPLHLGITEAGGARSGAVKSAIGLGLLLSEGIGDTLRISLAADPVE 246
           L+  +Y+ LA   D PLHLGITEAGG  SG +KSAIGLG LL  GIGDT+R+SL+ADPVE
Sbjct: 192 LSAAAYQALADATDAPLHLGITEAGGLMSGTIKSAIGLGNLLWMGIGDTIRVSLSADPVE 251

Query: 247 EVKVGFDILKSLRIRARGINFIACPTCSRQEFDVIGTVNALEQRLEDLITPMDVSIIGCV 306
           E+KVG+DILKSL +R RG+N I+CP+C+RQ FDVI TV ALEQRLE + TPM +SIIGCV
Sbjct: 252 EIKVGYDILKSLGLRHRGVNVISCPSCARQGFDVIKTVEALEQRLEHIKTPMSLSIIGCV 311

Query: 307 VNGPGEALVSTIGVTGGHNKSGFYEDGVRQRERFDNEQMIDQLEAKIRAKASMMD 361
           VNGPGEAL++ +G TGG   SG      +Q  +  NEQMID +  ++  +A+ +D
Sbjct: 312 VNGPGEALMTDVGFTGGGAGSGMVYLAGKQSHKMSNEQMIDHIVEQVEKRAAELD 366