Pairwise Alignments

Query, 373 a.a., flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase from Pectobacterium carotovorum WPP14

Subject, 371 a.a., 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (RefSeq) from Shewanella sp. ANA-3

 Score =  614 bits (1584), Expect = e-180
 Identities = 309/360 (85%), Positives = 336/360 (93%)

Query: 1   MHNAAPITRRKSTRIYVGKVPVGDGAPIAVQSMTNTRTTDVEATVNQIRALERVGVDIVR 60
           M+N  PI RR STRIYVG VP+GDGAPIAVQSMTNT+TTDVEATV QIRALE+VG DIVR
Sbjct: 1   MYNETPIKRRPSTRIYVGNVPIGDGAPIAVQSMTNTKTTDVEATVAQIRALEKVGADIVR 60

Query: 61  VSVPTMDAAEAFKLIKQQVNVPLVADIHFDYRIALKVAEYGVDCLRINPGNIGNEERIRS 120
           VSVPTMDAAEAFK+IKQ V+VPLVADIHFDYRIALKVAEYGVDCLRINPGNIGNEERIRS
Sbjct: 61  VSVPTMDAAEAFKVIKQSVSVPLVADIHFDYRIALKVAEYGVDCLRINPGNIGNEERIRS 120

Query: 121 VVDCARYNNIPIRIGVNGGSLEKDLQEKYGEPTPEALLESAMRHVDILDRLNFDQFKVSV 180
           VV+CAR  NIPIRIGVNGGSLEKDL +KY EPTPEALLESAMRHVDILDRLNFDQFKVSV
Sbjct: 121 VVECARDKNIPIRIGVNGGSLEKDLMDKYKEPTPEALLESAMRHVDILDRLNFDQFKVSV 180

Query: 181 KASDVFLAVQSYRLLAARIDQPLHLGITEAGGARSGAVKSAIGLGLLLSEGIGDTLRISL 240
           KASDVFLAV+SYRLLA +I QPLHLGITEAGGAR+GAVKSA+GLG+LL+EGIGDTLRISL
Sbjct: 181 KASDVFLAVESYRLLAKQIRQPLHLGITEAGGARAGAVKSAVGLGMLLAEGIGDTLRISL 240

Query: 241 AADPVEEVKVGFDILKSLRIRARGINFIACPTCSRQEFDVIGTVNALEQRLEDLITPMDV 300
           AADPVEE+KVGFDILKSLRIR+RGINFIACP+CSRQEFDVI TVN LE+RLED+ T MDV
Sbjct: 241 AADPVEEIKVGFDILKSLRIRSRGINFIACPSCSRQEFDVISTVNELERRLEDVTTAMDV 300

Query: 301 SIIGCVVNGPGEALVSTIGVTGGHNKSGFYEDGVRQRERFDNEQMIDQLEAKIRAKASMM 360
           SIIGCVVNGPGEALVS IG+TGGH KSG+Y++G RQ+ERFDN+ ++D LEAKIRAKAS M
Sbjct: 301 SIIGCVVNGPGEALVSHIGLTGGHRKSGYYDEGERQKERFDNDNLVDSLEAKIRAKASQM 360