Pairwise Alignments

Query, 453 a.a., HlyD family type I secretion periplasmic adaptor subunit from Pectobacterium carotovorum WPP14

Subject, 441 a.a., HlyD family type I secretion membrane fusion protein (RefSeq) from Shewanella loihica PV-4

 Score =  192 bits (487), Expect = 2e-53
 Identities = 124/434 (28%), Positives = 212/434 (48%), Gaps = 4/434 (0%)

Query: 23  QTMPEVSRAMAEDSP---RSIRFTLWAIGAFFLFFILWAGLANIDEVTRGDGKAIPSSRL 79
           ++ PE     A ++P   R+IR   + I       ++W+   NI+E+ +  G+ +P    
Sbjct: 9   RSWPEHEFTEAVEAPAEKRAIRRITFFIATAVFILLIWSIFTNIEEIAKAKGQVVPLGHR 68

Query: 80  QKIQNLEGGIITEVFIREGQVVNAGDPLLRLDDTRFASNVGETEADRLALLSRIERLNAE 139
           Q IQ+  GG +  + + EG +V  GD +     T   +   E ++ +  L  +IER  A 
Sbjct: 69  QVIQSQTGGTLASIAVAEGDLVQKGDLIANFVATDSQALKEELQSKQANLELKIERYTAF 128

Query: 140 INGQELVLSEEITTQAPKIAAGEKELYNSRRQQLHNEISGLEEQLIQRQQELRDFSAKEI 199
           +  +E   +       P + A          Q+    I+  E  + + + EL     +  
Sbjct: 129 LEEREPDFNA-YQLGFPALVAQHINALARMNQEKQAIIALSESDVAKSEAELASVEQEIT 187

Query: 200 QFRNSLGLLQQEIKMSEPLIAEGAISKVEVLRLRRAEVETRGQLDSIKLSIPRAESAIKE 259
             ++ +  ++Q +KM   +  + A+SK+ +L  ++       +L  ++      +  I  
Sbjct: 188 PLKDQIRSVEQTLKMMNSVKEQQAVSKLRMLESQQKLDAYIRELKVLEGRRSVLQRNIDN 247

Query: 260 SENKIEETRSRYKSEALSQLSEAQTSLNKIEATGKALEDRVNRTLVVSPVRGIVQQVLVN 319
            E ++ + ++   +E   + ++AQ  L  I A  K+ +  V +  V SPV GI+Q +  N
Sbjct: 248 QEKQLAQKQASLFNEVGEKRTDAQAELLGIVARLKSSDSLVQQNRVTSPVDGIIQSIPNN 307

Query: 320 TIGGVIQPGSDLVEIVPLDDKLLVEAKIRPQDIAFLHPGQDAIIKLTAYDYTIYGGLKGQ 379
           + G VIQPG  +  IVP     L+EAK+ P+DI F+  GQ A IK+ A+DY+ YG + G 
Sbjct: 308 SAGSVIQPGGTVAVIVPTTPTALLEAKLSPRDIGFVTVGQKARIKIDAFDYSRYGAIDGL 367

Query: 380 LEQISPDTVTDKEGNSFYIIRLRTDKNYLGSADKPLLIIPGMVASVDIITGKKTILSYLL 439
           +++ISP T  D++G  FY +++  DK Y G     L +IPGM    DI+TG KT+  YL 
Sbjct: 368 VKKISPSTDADEKGGVFYKVQIAIDKPYFGDQPDKLALIPGMTGEADIVTGDKTVFQYLW 427

Query: 440 KPIIRANAEALRER 453
           KP+     EA  ER
Sbjct: 428 KPVFTNVTEAFGER 441