Pairwise Alignments

Query, 453 a.a., HlyD family type I secretion periplasmic adaptor subunit from Pectobacterium carotovorum WPP14

Subject, 460 a.a., HlyD family type I secretion membrane fusion protein (RefSeq) from Shewanella loihica PV-4

 Score =  359 bits (922), Expect = e-104
 Identities = 187/453 (41%), Positives = 288/453 (63%), Gaps = 19/453 (4%)

Query: 20  ESLQTMPEVSRAMAEDSPRSIRFTLWAIGAFFLFFILWAGLANIDEVTRGDGKAIPSSRL 79
           + L+ + +V  AM  D+P S R  +WA+ A    F++WA  A +D VT G GK IPSS++
Sbjct: 8   QDLEMVDDVYGAMMTDAPTSHRLIIWALAALAFSFLVWAYFAELDRVTTGTGKVIPSSQV 67

Query: 80  QKIQNLEGGIITEVFIREGQVVNAGDPLLRLDDTRFASNVGETEADRLALLSRIERLNAE 139
           Q IQ+L+GGI+ E+++REG  V  G PL+R+DDTRF S+  + E +  +L + + RL AE
Sbjct: 68  QVIQSLDGGIMKELYVREGMTVTKGQPLVRIDDTRFRSDFAQQEQEVYSLQANVIRLRAE 127

Query: 140 ING------------------QELVLSEEITTQAPKIAAGEKELYNSRRQQLHNEISGLE 181
           +N                   Q L    E+T     +   +++ Y+ R   L N++  L 
Sbjct: 128 LNSITISDVAADWREQVKIAKQPLQFPPELTESEHDLIERQRDEYSGRLDNLSNQLEILA 187

Query: 182 EQLIQRQQELRDFSAKEIQFRNSLGLLQQEIKMSEPLIAEGAISKVEVLRLRRAEVETRG 241
            Q+ Q+QQE  + ++K      S  L+ +E++++ PL  +G + +VE+L+L R   + RG
Sbjct: 188 RQIQQKQQETEELASKINTLTTSFQLVTRELELTRPLADKGIVPEVELLKLERNVNDIRG 247

Query: 242 QLDSIKLSIPRAESAIKESENKIEETRSRYKSEALSQLSEAQTSLNKIEATGKALEDRVN 301
           +L S++L  P+ +++  E+  K  E    Y +EA +QL+E QT L++I        D+V+
Sbjct: 248 ELSSLRLLRPKLKASQDEAILKRREAVFVYAAEARTQLNEMQTRLSRINEAQVGARDKVS 307

Query: 302 RTLVVSPVRGIVQQVLVNTIGGVIQPGSDLVEIVPLDDKLLVEAKIRPQDIAFLHPGQDA 361
           +  +VSPV G ++ V +NT+GGV+QPG D++EIVP +D+LL+E KI P+DIAFLHPG  A
Sbjct: 308 KAEIVSPVNGTIKTVHINTLGGVVQPGIDIIEIVPSEDQLLIETKIIPKDIAFLHPGLPA 367

Query: 362 IIKLTAYDYTIYGGLKGQLEQISPDTVTDKEGNSFYIIRLRTDKNYLGSADKPLL-IIPG 420
           ++K+TAYD+T YGGL G +E IS DT  D+EGNSFY++R+RT+ + L   D  L+ IIPG
Sbjct: 368 VVKVTAYDFTRYGGLNGVVEHISADTTQDEEGNSFYLVRVRTELSSLTKDDGTLMPIIPG 427

Query: 421 MVASVDIITGKKTILSYLLKPIIRANAEALRER 453
           M+ +VD+ITG++++L Y+L PI+RA   ALRER
Sbjct: 428 MLTTVDVITGQRSVLEYILNPILRARDTALRER 460