Pairwise Alignments

Query, 457 a.a., murein transglycosylase D from Pectobacterium carotovorum WPP14

Subject, 398 a.a., Slt family transglycosylase (RefSeq) from Shewanella amazonensis SB2B

 Score =  190 bits (483), Expect = 6e-53
 Identities = 126/394 (31%), Positives = 199/394 (50%), Gaps = 27/394 (6%)

Query: 6   MIIASVLLAGCQVS------PHDTSQPKQHAQSLSSASQSEAGKYTDGREASARWLDDDS 59
           +++   +LAGCQV+      P +T    Q  Q      ++ A       EA A+      
Sbjct: 24  LLLTLTILAGCQVNTDTSGEPWETDAQPQPEQVPLVVKEATAPSEPALPEAEAK------ 77

Query: 60  LAQRDLWNFIGDELKMEVPENARIREQKMRYLKNKSYLHDVTLRAEPYMYWIVEQIKQRK 119
            A ++LW  I D   + VP ++ +         N  +  +    AEP++Y I+ +++ R 
Sbjct: 78  -AYQNLWQKIADAQTIAVPSHSEVTYFLGLNRNNGLFPINAPAAAEPWLYDIISELEARD 136

Query: 120 MPMELVLLPIVESAFDPSATSSANAAGLWQIIPGTGRNYGLKQNQWYDGRRDVIASTTAA 179
           MP+EL LLP++ES + P        AGLWQ+   TGRN+ L+ NQ +DGR D I +T AA
Sbjct: 137 MPLELALLPLIESGYHPGV-KGLGGAGLWQLSAQTGRNHHLRVNQSFDGRLDPIPATRAA 195

Query: 180 LDMMQRLNTMFDGDWLLTVAAYNSGEGRVMQAMKANKAKGKSTSFWALALPRETSIYVPK 239
           LD +  L  MF+ DWL  VAAYN GEG++  A++ N+ KGK+  F AL L R  +  + K
Sbjct: 196 LDYLLYLYEMFNNDWLSAVAAYNMGEGKLKTAIERNRRKGKAEDFLALGLSRNQAPTLYK 255

Query: 240 MLALSDILKNSKKYGVSLPQPNESRALAKVELGQQIELTQAAEMAGLSLNKLKSYNSGYK 299
            LA   +L++ +    S P    +  LA+  +   + L+  A+  G+S  +L   N  ++
Sbjct: 256 WLAALAVLRDPQTQSASFPPIANAPVLAREAVPNGVALSNIAQAMGMSAKELSRLNPAFR 315

Query: 300 RNVTAPNGPHYIMVPKAHVEQLKDSLADGDIAAIQPTRLAQTQSTPA-SQQYKVRSGDTL 358
             +   +G + I +P++ +  L  +L +     ++P       STP     Y+V+SGDTL
Sbjct: 316 DGIVPFSGKYQINLPESRLPALNAALVN-----LRP-------STPGKGGSYQVKSGDTL 363

Query: 359 SAIAARLNVSTKDLQSWNNLRSAGALKVGQTLQV 392
           S IA R  +    L S N L     +K GQ L++
Sbjct: 364 SGIAKRHGMRLDKLLSLNGLNMKSIIKPGQQLRL 397



 Score = 49.7 bits (117), Expect = 2e-10
 Identities = 42/142 (29%), Positives = 64/142 (45%), Gaps = 25/142 (17%)

Query: 330 IAAIQPTRLAQTQST--------PASQQYKVRSGDTLSAIAARLNVSTKDLQSWN----- 376
           +AA+   R  QTQS         P   +  V +G  LS IA  + +S K+L   N     
Sbjct: 257 LAALAVLRDPQTQSASFPPIANAPVLAREAVPNGVALSNIAQAMGMSAKELSRLNPAFRD 316

Query: 377 -----------NLRSAGALKVGQTLQVAKASGNGSSITYQVRKGDSLASIAKRHGVNIAD 425
                      NL  +    +   L   + S  G   +YQV+ GD+L+ IAKRHG+ +  
Sbjct: 317 GIVPFSGKYQINLPESRLPALNAALVNLRPSTPGKGGSYQVKSGDTLSGIAKRHGMRLDK 376

Query: 426 VMRWNTVINKNANIQPGDRLTL 447
           ++  N  +N  + I+PG +L L
Sbjct: 377 LLSLNG-LNMKSIIKPGQQLRL 397