Pairwise Alignments

Query, 457 a.a., murein transglycosylase D from Pectobacterium carotovorum WPP14

Subject, 333 a.a., putative membrane-bound lytic murein transglycosylase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 98.6 bits (244), Expect = 3e-25
 Identities = 72/238 (30%), Positives = 118/238 (49%), Gaps = 15/238 (6%)

Query: 84  REQKMRYLKNKSYLHDVTL----RAEPYMYWIVEQIKQRKMPMELVLLPIVESAFDPSAT 139
           RE+  R +   +Y+H  T+    RA  Y   I   +K   +P +   L ++ES  +  A 
Sbjct: 77  RERMDREMMAFTYMHSTTMLLIKRANRYFPIIEPILKANGIPDDFKYLMVIESNLNNIAR 136

Query: 140 SSANAAGLWQIIPGTGRNYGLKQNQWYDGRRDVIASTTAALDMMQRLNTMFDGDWLLTVA 199
           S A AAGLWQ +P TGR +GL+ N+  D R  +  +T AA    ++    + GDW+   A
Sbjct: 137 SPAGAAGLWQFMPATGREFGLEVNENVDERYHIEKATVAACKYFKQAYAKY-GDWMAVSA 195

Query: 200 AYNSGEGRVMQAMKANKAKGKSTSFWALALPRETSIYVPKMLALSDILKNSKKYGVSLPQ 259
           AYN+G+GR+   +    A   +   W   L  ETS Y+ ++LA+ +I KN ++YG  L +
Sbjct: 196 AYNAGQGRISSQLDQQLA-SHAMDLW---LVEETSRYMFRLLAVKEIFKNPQRYGFLLKK 251

Query: 260 PNESRALAKVELGQQ---IELTQAAEMAGLSLNKLKSYNSGYKRNVTAPN--GPHYIM 312
            +    +   E+        L+  A+  G++  +L+  N  + R  T  N  G  Y++
Sbjct: 252 EHLYPPIPYKEITVTTPIANLSDFAKQQGITYAQLRDANP-WLREQTLKNRTGKTYVL 308