Pairwise Alignments

Query, 325 a.a., 23S rRNA pseudouridine(1911/1915/1917) synthase RluD from Pectobacterium carotovorum WPP14

Subject, 324 a.a., ribosomal large subunit pseudouridine synthase D from Vibrio cholerae E7946 ATCC 55056

 Score =  464 bits (1195), Expect = e-135
 Identities = 220/317 (69%), Positives = 266/317 (83%)

Query: 1   MAQQVQLTATVAESQLGQRLDQALAELFPDYSRSRIKEWILENRVQINGNVTNKPKEKVL 60
           MA Q++LT TV +SQLGQRLDQA+AELF D+SRSR+KEW+LE ++ +NG+V  KP+ KV+
Sbjct: 1   MAHQIELTQTVKDSQLGQRLDQAVAELFTDFSRSRLKEWLLEGKIAVNGDVITKPRTKVM 60

Query: 61  GGESVAIDALIEEEARWEAQDIKLDIVYEDQDILVINKPRDLVVHPGAGNPDGTVLNALL 120
           GGE + + A +E+E RWEAQD+ L+IVYED DI+VINKPRD VVHPGAG  D TVLNALL
Sbjct: 61  GGEVITVQAELEDEQRWEAQDLPLNIVYEDDDIIVINKPRDFVVHPGAGQADKTVLNALL 120

Query: 121 HHYPEIVDVPRAGIVHRLDKDTTGLMVVAKTVPAQTRLVEALQAREITREYEAVAIGSMT 180
            HY  I +VPRAGIVHRLDKDTTGLMVVAKTVPAQTRLV ALQ R++TREYEA+ IG+MT
Sbjct: 121 FHYSPIAEVPRAGIVHRLDKDTTGLMVVAKTVPAQTRLVRALQKRDVTREYEAIVIGTMT 180

Query: 181 AGGMVEQPIARHATKRTHMAVHPMGKPAVTHYRIMEHFRAHTRLRLRLETGRTHQIRVHM 240
           AGGM+++PI RH+TKRT M+V PMGK AVTHYR+ EHFR HTRLRLRLETGRTHQIRVHM
Sbjct: 181 AGGMIDKPIGRHSTKRTLMSVSPMGKHAVTHYRVAEHFREHTRLRLRLETGRTHQIRVHM 240

Query: 241 AHINHPLVGDQLYGGRPRPPKGASEDFIEMLRGFDRQALHATMLRFYHPITGIHMEWHAE 300
           A++ HPL+GD  YGGR R PKGA+E+  EM+R FDRQALHA ML+F HP+TG  +E+HA 
Sbjct: 241 AYLQHPLLGDTAYGGRARIPKGATEELTEMIRDFDRQALHAVMLKFEHPVTGEELEFHAP 300

Query: 301 LPQDMVDLIDALKADTE 317
           +P DMV++  AL+ D +
Sbjct: 301 VPDDMVEMTLALREDAK 317