Pairwise Alignments

Query, 363 a.a., phage major capsid protein, P2 family from Pectobacterium carotovorum WPP14

Subject, 336 a.a., phage major capsid protein, P2 family from Vibrio cholerae E7946 ATCC 55056

 Score =  109 bits (272), Expect = 1e-28
 Identities = 87/333 (26%), Positives = 144/333 (43%), Gaps = 24/333 (7%)

Query: 1   MRKETRFKFNAYLTQLASINGVEVETLSKKFSVEPSVTQSLMEVVQESSDFLTRINIVPV 60
           + +  R   + +  QLA   GV    +++ F+V P +   L   + ES++FL  I +  V
Sbjct: 5   LTQSAREYMDNFAQQLAKSYGVS--NVAELFNVSPQLETKLRAAITESAEFLKMITVTTV 62

Query: 61  AELTGEKIGLGVSGSVASTTDTSSGDERETADLLSLEARQYKCEQMNFDFHIRYNTLDLW 120
            ++ G+ + +GVSG     T   +G        + +   +YK  + +    I +  L  W
Sbjct: 63  DQIEGQVVDVGVSGLY---TGRKAGGR--FTKQVGVGGHKYKLAETDSCAAITWAMLCQW 117

Query: 121 ARF---QDFQLRLRNAIAKRQSLDYIMAGWHGVKRAATSDRAKNPLLQDVAVGWLQKYRN 177
           A       F   L     +  +LD +  GW+GV   A +D + NPL QDV  GW+   +N
Sbjct: 118 ANQGGRDQFMKHLTEFSNQMFALDIMRIGWNGVSAEADTDPSANPLGQDVNEGWIAFVKN 177

Query: 178 ESPRRVMDKETAEDGTVIFEKIRVGLGEAAAYVTLDALVMDATNSMIDEWHQEDPDLVVI 237
               +V+D +   D T               Y TLDA+  D  N+ I    + DP L V 
Sbjct: 178 RKASQVVDVDVYFDET------------NGDYRTLDAMASDIINNQIHPMFRNDPRLTVF 225

Query: 238 CGRQLLADKYFPIANQQQPNSETLAADVIISQKRIGNLPAVRVPYFPANALLITRLDNLS 297
            G  L+      + ++    SE +AA  +   K I   PA   P+ P NA+++T  +NL 
Sbjct: 226 VGSGLIGAAQAKLYDKADKPSEQIAAQKL--DKTIAGRPAYVPPFLPDNAMVVTIPENLQ 283

Query: 298 IYYMDDSHRRHIEENAKRDRIENYESIKQDYVV 330
           +     + +R  +  + R + EN     + Y V
Sbjct: 284 VLTQHGTAQRKAKHESDRKQFENAYWRMEGYAV 316