Pairwise Alignments

Query, 818 a.a., ribonuclease R from Pectobacterium carotovorum WPP14

Subject, 886 a.a., ribonuclease R (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  385 bits (990), Expect = e-111
 Identities = 257/758 (33%), Positives = 384/758 (50%), Gaps = 35/758 (4%)

Query: 7   LEREAEKYESPIPS-REYILAHIAKRDTPISREELAADLQLTGEEALEALRRRLRAMERD 65
           + ++    ++P+ S R+ ++    +   P+  + L   L L  +E    L   L A++ +
Sbjct: 1   MAKDKTSRKAPMGSGRDALMQAFREAQRPLRLDMLLRILGLHRKEK-RTLEESLEALQAE 59

Query: 66  GQLIFTRRQCYALPEKLDLLRGTVIGHRDGFGFLRVEGRK-DDLYLSAEEMKRTIHGDVA 124
           G+++  R   + L + + ++ GT+   R G GF+  E R+  D+Y+   +M    HGD  
Sbjct: 60  GRILRLRGGAWGLTDHMKMVTGTLQVQRTGMGFVLPEDRRRTDIYVHPTQMGEAWHGDKV 119

Query: 125 LAQPLGADRKGRREGRIVRVLEPRTGQIVGRYFVDAGVGFVV--PDDSRLSFDILIPKEE 182
           +   L   R    EGRIVR+LE    ++  R     G   ++    D+R+    L+    
Sbjct: 120 VVVLLPGGRGRNPEGRIVRILERGLKEMPARVVKRMGRQGLLCRAADARIKVHFLVDVTG 179

Query: 183 INGARMGFVVVVELTQRATRRTKAVGKIVEILGDNMGTGLAVDIALRTHDIPHTWPPKVE 242
           + G      ++V                V  LG      +   +    H +P  +P  V 
Sbjct: 180 LEGKPQKDDILVVSPGERVEDGLWAATAVRHLGSEDDVSVQERLVKINHGVPTEFPVPVL 239

Query: 243 EQVKDLSEEVPEAAKKGRVDLRKLPLVTIDGEDARDFDDAVHCEPKRGGGWRLWVAIADV 302
           E+   L           R+DLR +  VTIDG  ARDFDDA+ C  ++G GWRLWVAIADV
Sbjct: 240 EEAATLPPAPGGGDFADRIDLRHMEFVTIDGARARDFDDAI-CVEEQGKGWRLWVAIADV 298

Query: 303 SYYVRPNTPLDHEARARGTSVYFPSQVVPMLPEVLSNGLCSLNPQVDRLCMVCEMTVSAQ 362
           S+YVRP + +D EA  R  S YFP  V PMLPE LSNGLCSLNP+V RL MV E+    +
Sbjct: 299 SHYVRPGSAMDREALERSNSYYFPQSVEPMLPEALSNGLCSLNPRVPRLAMVAEIYFFGE 358

Query: 363 GKLSSYKFYEAVMSSHARLTYTKVWH-ILQGDAELREHYKPLVGGLEELHRMYKALEHAR 421
           G     KFY AV+ S ARLTY +V   +L GD E R   +P++  LE+  ++ + L   R
Sbjct: 359 GSPGKCKFYPAVIESKARLTYGQVNRALLLGDEEERLVLRPVLPMLEQAEKLARVLHQRR 418

Query: 422 EVRGGIAFETEEAKFIFNAERRIERVEAVVRNDAHKLIEECMILANISAAKFVEKNEEPA 481
             RG + F+  E +  FN       +   VR+  H+++EE MI AN + A+F+ + E   
Sbjct: 419 RERGSLDFDLPEPEIAFNIYGETVDIRRKVRHFGHQIVEEFMIAANEAVARFLTEKEADF 478

Query: 482 LFRVHDQPSEDHVLALRSVLGELGLTLKGGMKPQPKDYA--ELMNELADRPDREMLQTML 539
           L+RVH +P  + + AL  VL   G  +  G+  +    A   ++ +        ++  + 
Sbjct: 479 LYRVHPEPEPEKLSALFKVLA--GTDIAQGLPREASAGALQTVLQKAHGSAQEFLISRLT 536

Query: 540 LRSMKQAIYDPENRGHFGLALTSYGHFTSPIRRYPDLSLHRAIKYLLSDRHERWTSTGGW 599
           LR+M QA Y PE+ GHFGLA   Y HFTSPIRRY DL +HRA+K  L       T  GG 
Sbjct: 537 LRTMMQARYSPEHEGHFGLASACYCHFTSPIRRYADLVVHRALKRALGG-DPGPTPAGG- 594

Query: 600 HSDINEMLQLGMHCSMTERRADEATRDVADWLKCDFMQDHVGEVFTGIIASVTGFGFFVR 659
                +++ +    S  ER+A EA R++   L    ++  VGE  TG+I+S+  FGFFV 
Sbjct: 595 -----KLVAIADQLSQHERKAMEAEREILKRLTVLLLRSRVGETLTGVISSILDFGFFVE 649

Query: 660 LKDLFIDGLVHVSTLDNDYYRYDNIGQRLIGESRGQVYRLGDEVEIRVEAVHMDERNIDF 719
           L ++  DG+V +S+LD+DYY +    Q L GE  G+ +RLG +V++R+  V++    ++ 
Sbjct: 650 LNEVLADGMVRLSSLDDDYYAFIPERQELRGERTGRTFRLGQQVKVRLADVNVGRLEVNL 709

Query: 720 ALISSTRKVRGEGKTARDRVKKPDSREAKPARRRRSAS 757
            L      VR EG                P RRR +AS
Sbjct: 710 EL------VREEGDDT-----------PVPTRRRSAAS 730