Pairwise Alignments

Query, 818 a.a., ribonuclease R from Pectobacterium carotovorum WPP14

Subject, 833 a.a., ribonuclease R from Burkholderia phytofirmans PsJN

 Score =  659 bits (1701), Expect = 0.0
 Identities = 370/839 (44%), Positives = 510/839 (60%), Gaps = 53/839 (6%)

Query: 1   MSQDPFLEREAEKYESPIPSREYILAHIAKRDTPISREELAADLQLTGEEALEALRRRLR 60
           M ++  +++   K+  PIPSRE IL  +   + P++  ++A  L +  +E  E   +RL 
Sbjct: 1   MQREKIIDKPLSKFPYPIPSREEILGVLRTSEAPLAANDIAEALSIKRQER-EGFFKRLG 59

Query: 61  AMERDGQLIFTRRQCYALPEKLDLLRGTVIGHRDGFGFLRVEGRKDDLYLSAEEMKRTIH 120
           AMERDGQ+   +R  Y L    + + G V GHRDG+GFL  +  +DDL+L   EM++ +H
Sbjct: 60  AMERDGQIRLDQRNLYQLTHPSNFVAGRVQGHRDGYGFLIRDDGQDDLFLPTAEMQKVMH 119

Query: 121 GDVALAQPLGADRKGRREGRIVRVLEPRTGQIVGRYFVDAGVGFVVPDDSRLSFDILIPK 180
            D  LA+ +G DR+GR EG IV V +    +++GR   + G   V P+D R+  DILI +
Sbjct: 120 NDRVLARIVGYDRRGRPEGHIVEVTDRANKRVIGRLLNENGALIVAPEDKRIGHDILI-Q 178

Query: 181 EEINGARMGFVVVVELTQRATRRTKAVGKIVEILGDNMGTGLAVDIALRTHDIPHTWPPK 240
           +    A++G VVVVELT   +R ++ +G++VE+LGD    G+ ++IA+R + +PH +   
Sbjct: 179 QNTKKAKVGQVVVVELTDFPSRHSQPLGRVVEVLGDIDDPGMEIEIAVRKYGVPHEFSQA 238

Query: 241 VEEQVKDLSEEVPEAAKKGRVDLRKLPLVTIDGEDARDFDDAVHCEPK---RGGGWRLWV 297
             ++   L +EV     + R+DLR +PLVTIDGEDARDFDDAV+CEP    RG G+RL V
Sbjct: 239 ALDEASRLPDEVRPVDARHRIDLRDVPLVTIDGEDARDFDDAVYCEPVQVGRGEGFRLIV 298

Query: 298 AIADVSYYVRPNTPLDHEARARGTSVYFPSQVVPMLPEVLSNGLCSLNPQVDRLCMVCEM 357
           AIADVS+YV P + LD +A  R TSVYFP +V+PMLPE LSNGLCSLNP VDR  +VC+M
Sbjct: 299 AIADVSHYVHPKSGLDADAIERSTSVYFPRRVIPMLPEKLSNGLCSLNPHVDRCVLVCDM 358

Query: 358 TVSAQGKLSSYKFYEAVMSSHARLTYTKVWHILQ---GDAELREHYKPLVGGLEELHRMY 414
            ++A+G++ +Y+FY  VM S ARLTYT+V  +L+   G    R     L+  L+ L+ +Y
Sbjct: 359 IITARGEVKAYQFYPGVMHSAARLTYTEVAAVLKNTKGPEATRR--AALLPQLQNLYGVY 416

Query: 415 KALEHAREVRGGIAFETEEAKFIFNAERRIERVEAVVRNDAHKLIEECMILANISAAKFV 474
           K+L  AR+ RG I F+T E   + NA+ +IE++    RNDAHKLIEECM+ AN+ AA F+
Sbjct: 417 KSLFAARQKRGAIDFDTTETYIVCNAQGKIEQIIPRTRNDAHKLIEECMLAANVCAADFL 476

Query: 475 EKNEEPALFRVHDQPSEDHVLALRSVLGELGLTLKGGMKPQPKDYAELMNELADRPDREM 534
           ++N+ P LFRVH  P+ + +  LR+ L  +GLTL GG KP   DYA LM ++ +RPD +M
Sbjct: 477 KRNKHPGLFRVHAGPTAEKLENLRTFLRGMGLTLAGGDKPHASDYAALMAQIRERPDAQM 536

Query: 535 LQTMLLRSMKQAIYDPENRGHFGLALTSYGHFTSPIRRYPDLSLHRAIKYLLSDRHERWT 594
           LQTMLLRSM+QA+Y P+N GHFGLA  +Y HFTSPIRRYPDL  HRAI  +L  R  +  
Sbjct: 537 LQTMLLRSMQQAVYSPDNIGHFGLAYEAYAHFTSPIRRYPDLLTHRAIYAILQGRKYQPE 596

Query: 595 STGGWHSDINEML---------------------------QLGMHCSMTERRADEATRDV 627
              G   ++N  L                           +LG+HCS  ERRADEA+RDV
Sbjct: 597 PPQG--VELNTALSPRARAMQQADDEKRGRVRGNNVAIWEELGLHCSANERRADEASRDV 654

Query: 628 ADWLKCDFMQDHVGEVFTGIIASVTGFGFFVRLKDLFIDGLVHVSTLDNDYYRYDNIGQR 687
             WLKC FM+D +GE + G++  VT FG FV+L  LFI+GLVHV+ L +DY++YD I   
Sbjct: 655 EAWLKCYFMRDKLGEEYGGMVNGVTSFGIFVQLDSLFIEGLVHVTELGSDYFQYDEIKNE 714

Query: 688 LIGESRGQVYRLGDEVEIRVEAVHMDERNIDFALISST------------RKVRGEGKTA 735
           L GE  G  YRL D V ++V  V +D R IDF L+  T             K  GE   A
Sbjct: 715 LRGERTGIRYRLSDRVRVQVSRVDLDARKIDFRLVRDTPIKPPLVRGPSADKSSGENGGA 774

Query: 736 RDRVKKP--DSREAKPARRRRSASKAPANFEPDAAFRKEGDSSAKSDKSKAKPKKNRDK 792
           R R   P      A  ARR+++A    A  +   A R        + KS  KP+  + +
Sbjct: 775 RVRALPPAEGGAPAPGARRKKAAPAQTAAVKEARAARGAAKKHGAATKSAPKPQARKKR 833