Pairwise Alignments

Query, 204 a.a., LysE family translocator from Pectobacterium carotovorum WPP14

Subject, 229 a.a., transporter, LysE family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  105 bits (262), Expect = 6e-28
 Identities = 65/198 (32%), Positives = 102/198 (51%), Gaps = 2/198 (1%)

Query: 4   TSLFVATIATLGMLSPGPDFFLVIKNATRYPRVAALMTAFGVICGVATHMAYCVAGLAVV 63
           T L +  I  LG +SPGP   +V+++     R   ++ A+    G+  +    + GLAVV
Sbjct: 30  TWLGLLAICCLGAMSPGPSLAMVVRHTLGGGRGKGIICAWAHSIGIGIYALVTLLGLAVV 89

Query: 64  ITTTPWLFNVLKYAGAAYLIWIGIQALLSRGGSKMDVSHQGQQNVSLKKAFLQGYLCNLL 123
           +   P +FN +   GA YL W+GIQAL S GG +  ++  G+   +L  A   G   +L 
Sbjct: 90  LKKAPLIFNGIAILGAVYLAWMGIQALRSNGGMQAKLA-AGEATDALTAA-RDGIAISLF 147

Query: 124 NPKATLFFLAMFTQVLNIHSGIGEKLWYAMIIWLLSVVWWPLLVLLFQSEPVRRGLAKAQ 183
           NPK  LFFLA+F+Q + +      +    +   ++  +W+ L+ L+     V   L +  
Sbjct: 148 NPKIMLFFLALFSQFVMVADSFTGQALIVLTPMVVDGLWYSLIALVLSHSSVLPKLREKA 207

Query: 184 KLVDKLLGTVLIALGIKV 201
            L+DKL G VLI L I+V
Sbjct: 208 GLIDKLSGVVLILLAIRV 225