Pairwise Alignments

Query, 382 a.a., glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit from Pectobacterium carotovorum WPP14

Subject, 389 a.a., Carbamoyl-phosphate synthase, small subunit (NCBI) from Rhodospirillum rubrum S1H

 Score =  376 bits (965), Expect = e-109
 Identities = 198/378 (52%), Positives = 252/378 (66%), Gaps = 6/378 (1%)

Query: 4   SALLVLEDGTQFHGRAIGAEGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNV 63
           +A+L L DGT F GR +GA G  VGEV FNT+MTGYQE++TDPSY+ QIVT  +PHIGNV
Sbjct: 14  TAVLALADGTLFWGRGVGALGEVVGEVCFNTAMTGYQEVMTDPSYAGQIVTFCFPHIGNV 73

Query: 64  GANANDEESPSVQAQGLVIRDLPLIASNYRSEESLSEYLKRNNIVAIADIDTRKLTRLLR 123
           G NA D ES    A+G V+R      +N+R+  +L+ +L    +V I+ +DTR+LTR +R
Sbjct: 74  GTNAEDIESTVPAARGCVLRADITEPANWRATGALNGWLAARGLVGISGVDTRQLTRRIR 133

Query: 124 EKGAQNGCII--AGDAPDAAVALEKAKAFPGLKGMDLAKEVTTAESYSWLQGSWTLEGEL 181
           + GA +G I   A    D    + KA+ +PGL+GMDLA EVT  ++Y+W +  W+L+G  
Sbjct: 134 DLGAPSGVIAHAADGVFDIPALVAKAQGWPGLEGMDLAAEVTCTQTYAWDETLWSLDGGY 193

Query: 182 PAAKNESELPYHVVAYDYGVKRNILRMLVDRGCRLTVVPAQTPAEDVLKLNPDGIFLSNG 241
                 S+  +HVVA DYG KRNILR L   GC++TVVPAQT  ++V+   PDGIFLSNG
Sbjct: 194 GRL---SDPRFHVVAIDYGAKRNILRNLASLGCKVTVVPAQTTLDEVMAHQPDGIFLSNG 250

Query: 242 PGDPEPCD-YAIRAIKTFLETDIPVFGICLGHQLLALASGAKTIKMKLGHHGGNHPVKDL 300
           PGDP     YA+  IK  +ET  P+FGICLGHQ+LALA GA T KM  GH G NHPVKD 
Sbjct: 251 PGDPAATGTYAVPVIKQLIETGKPLFGICLGHQMLALALGATTYKMATGHRGANHPVKDH 310

Query: 301 DNNCVMITAQNHGFAVDENNLPATLRVTHKSLFDHTVQGIHRTDKPAFSFQGHPEASPGP 360
               V IT+ NHGFAVD  +LPA +  TH SLFD+ ++G+    KP FS Q HPEASPGP
Sbjct: 311 TTGKVEITSMNHGFAVDRASLPAGVTETHTSLFDNVLEGLAVDGKPVFSVQYHPEASPGP 370

Query: 361 HDAAPLFDHFIDLIQTYR 378
            D+  LF  F+DL+   R
Sbjct: 371 EDSHYLFKRFVDLMDARR 388