Pairwise Alignments

Query, 137 a.a., large-conductance mechanosensitive channel protein MscL from Pectobacterium carotovorum WPP14

Subject, 148 a.a., putative ion channel (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  149 bits (376), Expect = 2e-41
 Identities = 76/144 (52%), Positives = 108/144 (75%), Gaps = 11/144 (7%)

Query: 2   SIIKEFREFAMRGNVVDLAVGVIIGAAFGKIVSSLVSDIIMPPLGLLIGGVDFKQFSLIL 61
           + +++F+ FAM+GNV+D+AVGV+IG AFGKIVSSLV+++IMPP+GLL+GGV+F     ++
Sbjct: 5   TFLQDFKAFAMKGNVIDMAVGVVIGGAFGKIVSSLVANVIMPPIGLLVGGVNFTDLKWVM 64

Query: 62  R------DAQGEIPAVVMNYGAFIQNIFDFIIVAFAIFIAIKLMNKMRRKQ--EDTPAAP 113
           +      D +   PAV ++YG F+Q  FDF+I+AFAIF+ I+L+ K+  K+  E+ PAAP
Sbjct: 65  KAAEVGADGKEIAPAVSLDYGQFLQATFDFLIIAFAIFLFIRLITKLTTKKAAEEAPAAP 124

Query: 114 PKPSA---EEKLLAEIRDLLKEQQ 134
           P P A   EE LL EIRDLLKE++
Sbjct: 125 PAPPAPTKEEVLLTEIRDLLKEKK 148