Pairwise Alignments

Query, 350 a.a., amino acid ABC transporter substrate-binding protein from Pectobacterium carotovorum WPP14

Subject, 340 a.a., Lysine-arginine-ornithine-binding periplasmic protein (NCBI) from Rhodospirillum rubrum S1H

 Score =  319 bits (817), Expect = 8e-92
 Identities = 151/315 (47%), Positives = 209/315 (66%), Gaps = 1/315 (0%)

Query: 36  TLKKIKARGELVCGVHPARHGFSAIDSKGQWTGLDVDYCRALAAAIFGDANKVRFAALST 95
           TL  +K+RGE+ CGV+    GF+  D KG WTG+DVD CRA+AAA+FGDA KV+F  L+ 
Sbjct: 27  TLDTVKSRGEVTCGVNNGLPGFALPDDKGHWTGIDVDICRAVAAAVFGDAKKVKFVPLNA 86

Query: 96  AQRFPAIQSGEVDVLSRNITADLSRDTSLGLNFAPPTFYTGTGFMVRTSANVKKVEDLDG 155
            +RF A+QSGE+DVLSRN T   +RD SLGL FA   +Y G GFMV+    V   ++L+G
Sbjct: 87  KERFTALQSGEIDVLSRNTTWTQTRDASLGLIFAGVNYYDGQGFMVKKELGVSSAKELNG 146

Query: 156 ATVCITPGSSTERNVAQIFASRNLHYTPVVIENNKEYVAAYLSGRCDVIARDKVALPGVR 215
           A++CI  G++TE N+A  F +  + Y+PVV + + + V  +  GRCDV+  D+  L  +R
Sbjct: 147 ASICIQSGTTTELNLADYFRANAMTYSPVVFDTSDQTVQGFAGGRCDVLTSDQSQLYALR 206

Query: 216 TFDAEKPSDHVILPGIYSKEPLAMAVRQGDDQWYDIVKWVVYATFNAEEMEIGQQNVDSK 275
               E P   ++LP + SKEPL   VRQGDDQW +IV+W ++A  NAEE+ +   N D  
Sbjct: 207 -IKLEDPKSAIVLPEVISKEPLGPMVRQGDDQWLNIVRWSLFAQLNAEELGVTSANADEV 265

Query: 276 LKSTDPDIQALLGVTGDYGQKLGLNNQWAYNLIKQVGNYGDIYNRHFGPDTPAPLERDLN 335
              TD +++ LLG  G+ G++LGL N WAY ++KQVGNYG+++ R+ G  +P  +ER LN
Sbjct: 266 KAGTDQNVKRLLGTEGEMGKQLGLGNDWAYAIVKQVGNYGEMFERNIGKGSPLEIERGLN 325

Query: 336 NLWTKGGLLYGLPIR 350
            LW KGG+ Y  PIR
Sbjct: 326 ALWNKGGIQYAPPIR 340