Pairwise Alignments

Query, 350 a.a., amino acid ABC transporter substrate-binding protein from Pectobacterium carotovorum WPP14

Subject, 350 a.a., extracellular solute-binding protein, family 3 (NCBI) from Rhodospirillum rubrum S1H

 Score =  280 bits (716), Expect = 4e-80
 Identities = 150/349 (42%), Positives = 203/349 (58%), Gaps = 3/349 (0%)

Query: 2   LRKLLSLTTATVLTLGSLLLPVAQATAADAGNGETLKKIKARGELVCGVHPARHGFSAID 61
           L+K+     A  L     L  +  +++A+AG  ETL  IKARG +  GV     GFSA D
Sbjct: 5   LKKIAFKAQAAGLAAALALCGLGFSSSAEAG--ETLDAIKARGVIKIGVGGNSPGFSAPD 62

Query: 62  SKGQWTGLDVDYCRALAAAIFGDANKVRFAALSTAQRFPAIQSGEVDVLSRNITADLSRD 121
           S G+W G  +D  RALA  +F D  K  F   S  QR PA+QSGE D+L   +T  ++R 
Sbjct: 63  SAGRWQGFFIDIGRALAVTVFNDPEKAEFVNSSPQQRLPALQSGEFDILLSGVTQTITRA 122

Query: 122 TSLGLNFAPPTFYTGTGFMVRTSANVKKVEDLDGATVCITPGSSTERNVAQIFASRNLHY 181
           T LG +F P  FY G G +V     + K  +LDGATVC+  G++ E N+A  F    + +
Sbjct: 123 TKLGFHFGPVVFYDGQGLLVPKKLGITKGSELDGATVCVQTGTTGELNIADFFRQHKISF 182

Query: 182 TPVVIENNKEYVAAYLSGRCDVIARDKVALPGVRTFDAEKPSDHVILPGIYSKEPLAMAV 241
            PVVIE + E++ A+ SGRCDV+ +D   L   RT      +D+V+LP   SKEPLA A+
Sbjct: 183 KPVVIEESNEFLKAFASGRCDVLTQDSSDLAIRRTL-LPNAADYVLLPERISKEPLAPAI 241

Query: 242 RQGDDQWYDIVKWVVYATFNAEEMEIGQQNVDSKLKSTDPDIQALLGVTGDYGQKLGLNN 301
           R GDD+W +IV W VYA   AEE+ I Q  +DS L S +P I+  LGV     +  GL+ 
Sbjct: 242 RYGDDRWLEIVNWTVYALIEAEELGITQATIDSFLGSDNPSIRRFLGVDPSLAEATGLDA 301

Query: 302 QWAYNLIKQVGNYGDIYNRHFGPDTPAPLERDLNNLWTKGGLLYGLPIR 350
           ++AYN+IK +GNYG+++ R  G  +    ER  N  WT+GGLLY  P R
Sbjct: 302 KFAYNIIKALGNYGEVFERSVGKASKLGFERGYNQPWTQGGLLYSPPFR 350