Pairwise Alignments

Query, 350 a.a., amino acid ABC transporter substrate-binding protein from Pectobacterium carotovorum WPP14

Subject, 271 a.a., extracellular solute-binding protein family 3 (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score = 96.7 bits (239), Expect = 6e-25
 Identities = 71/253 (28%), Positives = 116/253 (45%), Gaps = 14/253 (5%)

Query: 13  VLTLGSLLLPVAQATAADAGNGETLKKIKARGELVCGVHPARHGFSAIDSKG-QWTGLDV 71
           ++ L   L  V   T A AG    ++ IKARG LVCGV  +   F  ID +  Q  G D+
Sbjct: 4   LVLLAVALCVVLTGTMAHAGK---IEDIKARGALVCGVKDSTVPFGYIDEQSKQIVGFDI 60

Query: 72  DYCRALAAAIFGDANKVRFAALSTAQRFPAIQSGEVDVLSRNITADLSRDTSLGLNFAPP 131
           D C+A+A  +     K+    +++A R P +  G VD+++  +T    RD  +  +F+  
Sbjct: 61  DICKAVADKL---GVKLELKTVTSATRIPMLTQGSVDMVAATMTHKFERDDVI--DFSIT 115

Query: 132 TFYTGTGFMVRTSANVKKVEDLDGATVCITPGSSTERNVAQIFASRNLHYTPVVIENNKE 191
            F  G   +V+    VK   DL G  V    GS++E+N+     +     T V  +   +
Sbjct: 116 YFMDGQKLLVKKGGGVKSAADLKGKKVATAKGSTSEKNI----KAAQPEATVVSFDEYPQ 171

Query: 192 YVAAYLSGRCDVIARDKVALPGVRTFDAEKPSDHVILPGIYSKEPLAMAVRQGDDQWYDI 251
              A   G+ + +  D   L G+R  D E P    I+    S EP  + + + D ++ D+
Sbjct: 172 AFLALKQGKAEAVTTDSTILLGLRNSDPE-PDKWEIVGDYISPEPYGLGLAENDSKFRDL 230

Query: 252 VKWVVYATFNAEE 264
           V   +   +N+ E
Sbjct: 231 VNRTLVDLWNSGE 243