Pairwise Alignments

Query, 350 a.a., amino acid ABC transporter substrate-binding protein from Pectobacterium carotovorum WPP14

Subject, 338 a.a., cationic amino acid ABC transporter, periplasmic binding protein (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  284 bits (727), Expect = 2e-81
 Identities = 146/328 (44%), Positives = 193/328 (58%), Gaps = 2/328 (0%)

Query: 24  AQATAADAGNGETLKKIKARGELVCGVHPARHGFSAIDSKGQWTGLDVDYCRALAAAIFG 83
           A   AA     +TL++++ARG + CG+     GF++ D+ G+W G DV  CRA+AAA+FG
Sbjct: 12  AAGLAATGAAADTLEEVQARGAVNCGISTGLVGFASQDANGEWQGFDVAVCRAVAAAVFG 71

Query: 84  DANKVRFAALSTAQRFPAIQSGEVDVLSRNITADLSRDTSLGLNFAPPTFYTGTGFMVRT 143
           D   V F  ++   RF  + SGE+D+L+RN T   SRD  L L F    +Y G GFMV  
Sbjct: 72  DPTAVNFNPVTNQVRFEVLNSGEIDMLARNTTWTFSRDVDLKLEFTGINYYDGQGFMVPK 131

Query: 144 SANVKKVEDLDGATVCITPGSSTERNVAQIFASRNLHYTPVVIENNKEYVAAYLSGRCDV 203
           +  V    +LDGATVCI  G++TE N+A  F + N+ + PV I    E    YL+G CDV
Sbjct: 132 ALGVSSATELDGATVCIQKGTTTELNLADFFRANNISFEPVPISTASEAQQQYLAGACDV 191

Query: 204 IARDKVALPGVRTFDAEKPSDHVILPGIYSKEPLAMAVRQGDDQWYDIVKWVVYATFNAE 263
              D   L   R    E P +HV+LP I SKEPL   VR GD++W DIV+W + A   AE
Sbjct: 192 YTTDASGLAATRA-SFESPDEHVVLPEIISKEPLGPLVRHGDNEWGDIVRWTLNALIAAE 250

Query: 264 EMEIGQQNVDSKLKSTD-PDIQALLGVTGDYGQKLGLNNQWAYNLIKQVGNYGDIYNRHF 322
           E+ +   NV      TD P+I  LLG  G+ G++LGL+  WA N+IK  GNYG+I+  H 
Sbjct: 251 ELGVTSANVAELAAGTDNPEINRLLGTEGNLGEQLGLSADWAVNVIKAGGNYGEIFETHI 310

Query: 323 GPDTPAPLERDLNNLWTKGGLLYGLPIR 350
           G +TP  L R LN  WT+GGLLY  P R
Sbjct: 311 GENTPIGLARGLNAQWTEGGLLYAPPFR 338