Pairwise Alignments

Query, 419 a.a., transcription termination factor Rho from Pectobacterium carotovorum WPP14

Subject, 477 a.a., transcription termination factor rho from Caulobacter crescentus NA1000

 Score =  570 bits (1470), Expect = e-167
 Identities = 276/416 (66%), Positives = 348/416 (83%)

Query: 1   MNLTELKNTPVSELITLGENMGLENQARMRKQDIIFAILKQHAKSGEDIFGDGVLEILQD 60
           M+L ELK    ++L+   E   +EN   MRKQD++FAILK  A+ G +I G G +E+LQD
Sbjct: 60  MSLQELKEKSPADLLAFAETFEVENANSMRKQDMMFAILKTLAEEGVEISGSGTMEVLQD 119

Query: 61  GFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTISGKIRPPKEGERYFALLKVNEVN 120
           GFGFLRS +++YL GPDDIYVSPSQIR++ LRTGD++ G IR P+EGERYFAL  V ++N
Sbjct: 120 GFGFLRSPEANYLPGPDDIYVSPSQIRKYGLRTGDSVEGAIRSPREGERYFALTSVTKIN 179

Query: 121 YDKPENARNKILFENLTPLHANSRLRMERGNGSTEDLTARVLDLASPIGRGQRGLIVAPP 180
           ++ P+N R+K+ F+NLTPL+   RL ME  + + +D + RV+D+ +P+G+GQR LIVAPP
Sbjct: 180 FESPDNVRHKVHFDNLTPLYPEERLNMELPDPTVKDRSGRVIDIVAPLGKGQRCLIVAPP 239

Query: 181 KAGKTMLLQNIAQSIAYNHPDCVLMVLLIDERPEEVTEMQRLVKGEVVASTFDEPASRHV 240
           + GKT++LQNIA+SI  NHP+C L+VLLIDERPEEVT+MQR VKGEV+ASTFDEPA+RHV
Sbjct: 240 RVGKTVMLQNIAKSIETNHPECYLIVLLIDERPEEVTDMQRTVKGEVIASTFDEPATRHV 299

Query: 241 QVAEMVIEKAKRLVEHKKDVIILLDSITRLARAYNTVVPASGKVLTGGVDANALHRPKRF 300
           QVAEMVIEKAKRLVEHK+DV+ILLDS+TRL RAYNT VP+SGKVLTGGVDANAL RPKRF
Sbjct: 300 QVAEMVIEKAKRLVEHKRDVVILLDSVTRLGRAYNTTVPSSGKVLTGGVDANALQRPKRF 359

Query: 301 FGAARNVEEGGSLTIIATALVDTGSKMDEVIYEEFKGTGNMELHLARKIAEKRVFPAIDY 360
           FGAARNVEEGGSL+IIATAL+DTGS+MDEVI+EEFKGTGN E+ L RK+A+KR+FPAID 
Sbjct: 360 FGAARNVEEGGSLSIIATALIDTGSRMDEVIFEEFKGTGNSEIVLDRKVADKRIFPAIDV 419

Query: 361 NRSGTRKEELLTTSEELQKMWILRKIIHPMGEIDAMEFLINKLAMTKTNDEFFDMM 416
            +SGTRKEEL+T  ++LQK ++LR+I++PMG  DA+EFL++KL  +KTN +FF  M
Sbjct: 420 LKSGTRKEELITPRDQLQKTYVLRRILNPMGASDAIEFLLDKLRQSKTNGDFFQSM 475