Pairwise Alignments

Query, 516 a.a., ABC transporter substrate-binding protein from Pectobacterium carotovorum WPP14

Subject, 520 a.a., peptide-binding periplasmic ABC transporter protein from Sinorhizobium meliloti 1021

 Score =  224 bits (571), Expect = 6e-63
 Identities = 159/510 (31%), Positives = 255/510 (50%), Gaps = 26/510 (5%)

Query: 1   MKKSTLALLFTVLFSSSPLVYSADLNIGLASSTTSMDPQFYVSGANSAMARNIFDGLVVQ 60
           MKK  L L  T+L   +   ++  L  G A    S+DP  Y      +   ++++GLV  
Sbjct: 2   MKK--LGLAATMLMGLTLSGHAETLKWGAARDIYSLDPYSYGDSYTLSFLNHVYEGLVRY 59

Query: 61  DEKQQIAPALATSWKVIDDKTWEFVLRPGVKFHDGSDFTAKDVIASIKRVALASKNSPSS 120
           D   +I PALA SW+ + D  W F LR GVKFHDG++FTA DV+AS+KRV+        +
Sbjct: 60  DANLKIEPALAESWETVSDTVWRFHLRKGVKFHDGAEFTADDVLASLKRVSDPVSPLRGN 119

Query: 121 YAPYVSDIAEVIEVNPLTVRIKTKEASPLLLNNLSRISILPA---RLENVPTETLNSGK- 176
              Y S      +V+  T+ I+     PLLLN+L+ I +  A   +  N    T    K 
Sbjct: 120 LPAYKSS----KKVDDHTIDIELSGPYPLLLNDLTNIHVFDAGWLKTNNSEKPTDVGAKI 175

Query: 177 ------DVIGTGPFKFVSWVPDDRVVLSRNDDYWG--GKAEWDNVTVRVFKNSSARVAAV 228
                    GTGPFK  S VPD + VL +N D+W    K+  D +      +++ RVAA+
Sbjct: 176 EGYATYHTNGTGPFKLESRVPDSKTVLVKNPDWWDKTSKSNVDRIEFTPITSAATRVAAL 235

Query: 229 LSGDVDMIENVPTADSSNIEKNQQLKTISTPGNRVIYLHMDQQREESPFAKGPDGKNPLL 288
           LSG+V+  EN P+ D   ++    LK +     R + +  +++ E    A G + K   L
Sbjct: 236 LSGEVNFTENAPSQDLPRLQAQPDLKVMERTDLRTVMVGFNRKPE---LANGSENKFNDL 292

Query: 289 KKEVRQAMSLAINRQAIVDRVMEGQAVVASQLVPKGYPGYSASIPAPV-YNPEKAKQELA 347
           +  VRQA + A++R  I  RVM G++  A  +V    PGY+  +   + ++P  +K+ LA
Sbjct: 293 R--VRQAFAHALDRDLIQQRVMRGKSRTAGAVVAPEIPGYAPELDTTLAFDPALSKKLLA 350

Query: 348 AAGYPDGFTLTFHASNDRYPNDSKIAQAIGQMFTRAGIKTEVVTMPGSVYF-SRASRLEF 406
            AG  D +  T   + D Y N+ ++ Q +  + +RAG K ++   P +     R S    
Sbjct: 351 EAGASD-YPFTLVCTTDAYVNEEELCQGLVNLLSRAGFKPQLDIAPTAAQAPKRTSGKSD 409

Query: 407 SLIMGGAAIETGEASGVLGPLLETFGPNAGQGNRGRYSNPVFDKTLNEARATLDETKRDA 466
             ++G A     ++  +L  +++T   NAG  N G +S P  DK + +A   +D TKR A
Sbjct: 410 VYLIGWATEPMLDSYSILLQMIQTKTANAGVFNWGGWSYPEIDKLIVQASTEMDRTKRLA 469

Query: 467 LLAEAMNIGMNDLGVIPVMFLSNTWAMKKQ 496
           L ++A+ +  +++ ++P+      W M  +
Sbjct: 470 LQSKALQMVKDEIVMLPLHQQPMAWVMSNK 499