Pairwise Alignments

Query, 283 a.a., ABC transporter-related protein (RefSeq) from Shewanella loihica PV-4

Subject, 906 a.a., ribosome-associated ATPase from Pseudomonas putida KT2440

 Score =  112 bits (281), Expect = 2e-29
 Identities = 74/245 (30%), Positives = 124/245 (50%), Gaps = 12/245 (4%)

Query: 14  HGLTKAFDGQLAIDDLSMTLYPGMVVGLLGQNGAGKSTLMRCALGILDVTEGQIEILGGT 73
           H LT  F    A++ +S  +  G + G LG NG GK+T M+   G++  +EG   +LG  
Sbjct: 272 HDLTLRFGDFTAVNKVSFAIGRGEIFGFLGSNGCGKTTTMKVLTGLMPASEGSASLLGRP 331

Query: 74  SDNISSAQKELIGYVPQQPFGYEGFTVERALALHRSFY--PNWDGSLE-QEWLSRFQLDG 130
            D    A ++ +G++ Q    Y   +  + LALH   +  P  + +    E + RF L  
Sbjct: 332 VDASDLATRKRVGFMSQSFSLYGELSTRQNLALHARLFDLPKAESAQRIDELIERFDLAA 391

Query: 131 A--QQVQRLSVGQRQSLALIMAMAYRPKLLILDEPVASLDPIARREFMSDLFDLALDAGS 188
              Q    L +G RQ L+L +A+ +RP++LILDEP + +DP AR +F   L +L+ + G 
Sbjct: 392 IADQPSGALPLGLRQRLSLAVAVLHRPEVLILDEPTSGVDPAARDDFWRLLVELSREQGV 451

Query: 189 AVLFSSHITSDLERVASHVALMRKGKLVLFKEIDALRESVQLVSLKPGESLPEGLVVLNR 248
            +  S+H  ++ +R    ++LM  G+++     DAL+   Q      G++L +  V    
Sbjct: 452 TIFLSTHFMNEAQR-CDRISLMHAGRVLACDTPDALQHQYQ------GDTLEDAFVRCLE 504

Query: 249 QQDKL 253
           Q  +L
Sbjct: 505 QAQEL 509



 Score = 73.2 bits (178), Expect = 2e-17
 Identities = 49/178 (27%), Positives = 83/178 (46%), Gaps = 9/178 (5%)

Query: 7   NQAILAFHGLTKAFDGQLAIDDLSMTLYPGMVVGLLGQNGAGKSTLMRCALGILDVTEGQ 66
           N   L   G++  +   +A+  L  +L  G    L+G +GAGKSTL+    G+  + +G+
Sbjct: 2   NAPALLAEGISHRYGDLIALHPLGFSLPVGTRCALIGPDGAGKSTLLGLIAGVKRLQQGE 61

Query: 67  IEILGGT--SDNISSAQKELIGYVPQQPFG--YEGFTVERALALHRSFYPNWDGSLEQEW 122
           +++LGG+       +A    + ++PQ      Y   ++   +    + +       EQ  
Sbjct: 62  LQVLGGSIRQRRHRTALYPKVAFMPQGLGNNLYPELSISENIRFFATLFGLGRRECEQRM 121

Query: 123 LSRFQLDGAQQVQ-----RLSVGQRQSLALIMAMAYRPKLLILDEPVASLDPIARREF 175
            +  Q    Q        +LS G +Q L L  A+ + P LLILDEP   +DP++RR F
Sbjct: 122 ANLLQATDLQHFAQRPAGKLSGGMKQKLGLCCALIHEPDLLILDEPTTGVDPLSRRRF 179