Pairwise Alignments

Query, 217 a.a., TetR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

Subject, 223 a.a., hypothetical protein from Pseudomonas sp. DMC3

 Score =  120 bits (302), Expect = 2e-32
 Identities = 68/217 (31%), Positives = 123/217 (56%), Gaps = 2/217 (0%)

Query: 1   MKTRDKIVHAALALFNEHGERAITTNHIAAHLGISPGNLYYHFRNKEDIIRSIFSLYEQH 60
           +KT ++IV  +L LFN+ GER+++TNHIAAH+ ISPGNLYYHF NK+ II  +FS YE  
Sbjct: 5   IKTSERIVQNSLELFNQQGERSVSTNHIAAHMEISPGNLYYHFPNKQAIIAVLFSEYEAL 64

Query: 61  LETGFQPYEGKKVDVDLLIGYFDALFYTLWQFRFMYANLVIILSRDEVLNKQYTVTHEQV 120
           +++  +P +G+   V+    Y   L   +W++RF++ +L  +L  D  L  +Y    ++ 
Sbjct: 65  VDSFLRPPQGRPATVEDKRFYLKELLSAMWRYRFLHRDLEHLLDSDAELAARYRRFSQRC 124

Query: 121 LKRATSILTQLKQDGVLVIDDAEITPLADTIRMVACFWISNQLTHSE-ATQITKTSLYEG 179
           + +  +I       G+L +D  +I  L     ++   W+    T  E +  +++ ++  G
Sbjct: 125 VIQGAAIYEGFVAAGILKMDRVQIESLTLNAWIILTSWVRFLCTTRENSNHLSEQAVKRG 184

Query: 180 LLRVLMIFKAYASESARPTFIRL-EQHYQALAKAEQE 215
           + +VL++   + ++ AR     L ++ Y  LA+A ++
Sbjct: 185 VYQVLVLEAGFVTDQARDEVNALFDEFYVPLAQALED 221