Pairwise Alignments

Query, 436 a.a., osmolarity sensor protein (RefSeq) from Shewanella loihica PV-4

Subject, 450 a.a., sensory histidine kinase in two-component regulatory system with OmpR from Escherichia coli BL21

 Score =  353 bits (906), Expect = e-102
 Identities = 191/434 (44%), Positives = 277/434 (63%), Gaps = 4/434 (0%)

Query: 6   RFLPRSAFSQTVLLIGSLLLVNQLVSYLSVAVYFIQPTYQQINQLIARQVNLLFVDGVDV 65
           RF PRS+F++T+LLI +LL  + + +YL V  + I  + QQ N+++A +V +L  D + +
Sbjct: 5   RFSPRSSFARTLLLIVTLLFASLVTTYLVVLNFAILLSLQQFNKVLAYEVRMLMTDKLQL 64

Query: 66  -GREHLSMVDALNAKV-RDDSMEIYNLKDAREAGVDRAAYYSLLSAQMSEHLGGKAEVRI 123
                L +  A   ++ R+  + +Y+ + A EAG+  A +Y  LS QM++ LGG  EVR+
Sbjct: 65  EDGTQLVVPPAFRREIYRELGISLYSNEAAEEAGLRWAQHYEFLSHQMAQQLGGPTEVRV 124

Query: 124 AQGKEFEI-WIRPPQAPSVWIKVPLTGFNEFGLSPLTLYLMVIGALSVAGGWWFARKQNK 182
              K   + W++   +P++W++VPLT  ++   SPL  Y + I  L++ G W F R QN+
Sbjct: 125 EVNKSSPVVWLKTWLSPNIWVRVPLTEIHQGDFSPLFRYTLAIMLLAIGGAWLFIRIQNR 184

Query: 183 PLKRLQKAAISVSRGDYPAPLPPSGSTEIIEVTNAFNQMSRSMQQLEQDRALLMAGISHD 242
           PL  L+ AA+ V +G  P PL   G++E+  VT AFN M+  ++QL  DR LLMAG+SHD
Sbjct: 185 PLVDLEHAALQVGKGIIPPPLREYGASEVRSVTRAFNHMAAGVKQLADDRTLLMAGVSHD 244

Query: 243 LRTPLTRIRLASEMMVEEDEYLKEGIVHDIEDMDAIINQFIAYIRQDQEANRELVQINDL 302
           LRTPLTRIRLA+EMM E+D YL E I  DIE+ +AII QFI Y+R  QE   E+  +N +
Sbjct: 245 LRTPLTRIRLATEMMSEQDGYLAESINKDIEECNAIIEQFIDYLRTGQEMPMEMADLNAV 304

Query: 303 LQDIAQAETNRDGEIVLALNE-CPEIPMQAVAVKRIISNLVENAFRYGNGWVQLSSSFDG 361
           L ++  AE+  + EI  AL     E+ M  +++KR ++N+V NA RYGNGW+++SS  + 
Sbjct: 305 LGEVIAAESGYEREIETALYPGSIEVKMHPLSIKRAVANMVVNAARYGNGWIKVSSGTEP 364

Query: 362 RRVGFGVEDNGPGIPSDQIPKLFQPFTQGDSARGSVGSGLGLAIIKRIVDRHQGQVVLTN 421
            R  F VED+GPGI  +Q   LFQPF +GDSAR   G+GLGLAI++RIVD H G + L  
Sbjct: 365 NRAWFQVEDDGPGIAPEQRKHLFQPFVRGDSARTISGTGLGLAIVQRIVDNHNGMLELGT 424

Query: 422 RPEGGLHAQVWLPL 435
              GGL  + WLP+
Sbjct: 425 SERGGLSIRAWLPV 438