Pairwise Alignments

Query, 295 a.a., transporter DMT superfamily protein (RefSeq) from Shewanella loihica PV-4

Subject, 296 a.a., predicted chloramphenical resistance permease (NCBI) from Escherichia coli BW25113

 Score =  338 bits (867), Expect = 9e-98
 Identities = 162/287 (56%), Positives = 221/287 (77%), Gaps = 2/287 (0%)

Query: 7   RKGVALAICAYCLWGFAPLYFKLLNHVSATEILLHRVIWSFVFMLILMQFIGGFAKLRAL 66
           R+GV LA+ AY +WG AP YFKL+ +V A EIL HRVIWSF FM++LM     ++ L+ L
Sbjct: 7   RQGVLLALAAYFIWGIAPAYFKLIYYVPADEILTHRVIWSFFFMVVLMSICRQWSYLKTL 66

Query: 67  FRQPKQLGVLALTSVLIAGNWLLFIWAINNDHMLDASLGYFINPLINVLLGMVFLQERLR 126
            + P+++ +LA+++VLI GNWLLFIWA+NN HML+ASLGYFINPL+N++LGM+FL ER R
Sbjct: 67  IQTPQKIFMLAVSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFR 126

Query: 127 KLQWAAVSLACAGVLIQLISFGSIPVVSLGLAASFGVYGLLRKKVNIDAKTGLLVETAIL 186
           ++QW AV LA  GVL+QL +FGS+P+++LGLA SF  YGL+RKK+ ++A+TG+L+ET  L
Sbjct: 127 RMQWLAVILAICGVLVQLWTFGSLPIIALGLAFSFAFYGLVRKKIAVEAQTGMLIETMWL 186

Query: 187 VPVALLYLAMNLDDTS--ILENSWQMNLLLMAAGIVTSIPLLCFAGAATRIPLSMLGFFQ 244
           +PVA +YL    D ++  + +N   +NLLL+AAGIVT++PLLCF  AATR+ LS LGFFQ
Sbjct: 187 LPVAAIYLFAIADSSTSHMGQNPMSLNLLLIAAGIVTTVPLLCFTAAATRLRLSTLGFFQ 246

Query: 245 YIGPSIMFIMAVSLFNEPFDLEKGITFAFIWSALVIFTLDLALKSRR 291
           YIGP++MF++AV+ + E    +K +TFAFIW AL IF +D     RR
Sbjct: 247 YIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFVMDAIYTQRR 293