Pairwise Alignments

Query, 610 a.a., ATP-dependent DNA helicase RecQ (RefSeq) from Shewanella loihica PV-4

Subject, 609 a.a., DNA helicase RecQ from Rhodanobacter sp000427505 FW510-R12

 Score =  546 bits (1407), Expect = e-160
 Identities = 290/597 (48%), Positives = 390/597 (65%), Gaps = 12/597 (2%)

Query: 20  LQTVFGYRTFRTGQREVIEQVCGGQDALVIMPTGGGKSLCYQLPALVLHGLTLVVSPLIS 79
           LQ++FGY +FR  Q+ V+E +  G DALV+MPTGGGKSLCYQ+PAL+  G  +VVSPLI+
Sbjct: 10  LQSIFGYPSFRGQQQAVVEHLAEGGDALVLMPTGGGKSLCYQIPALLRQGTGIVVSPLIA 69

Query: 80  LMKDQVDSLKQMGVAAAYLNSSQSREEALTIYRQLHNGELKLLYVSPERLLTDSFIERLH 139
           LM+DQVD+L++ GVAAAYLNSS        + RQL  GEL LLYV+PERLLT  F+  L 
Sbjct: 70  LMQDQVDALREAGVAAAYLNSSLGAAAQREVERQLLAGELNLLYVAPERLLTSRFLGLLE 129

Query: 140 NLPLSLFAIDEAHCISQWGHDFRPEYAALGQLKQLFPRVPMMALTATADKATREDICQRL 199
           ++ ++LFAIDEAHC+SQWGHDFRPEY  L  L Q FP+VP +ALTATAD  TRE+I +RL
Sbjct: 130 SIEVALFAIDEAHCVSQWGHDFRPEYRELVVLHQRFPQVPRIALTATADPRTREEIVERL 189

Query: 200 GIAPF-ELLTSFDRPNIRYTVAEKLNAANQLRQFIQAQNGNSGIIYCSSRRRVDEVAERL 258
            +      ++SFDRPNI Y V  + NA  QL +F+Q   G SGI+YC SRR+VD+ A  L
Sbjct: 190 ALQEARRFVSSFDRPNIGYRVGLRHNAKRQLAEFLQGHRGESGIVYCLSRRKVDDTAAWL 249

Query: 259 RMQGYHADAYHAGKTQEERADIQERFLKDQLDIVVATVAFGMGINKSNVRFVVHYDIPKS 318
              G  A  YHAG     RA  Q+RFL++   ++VATVAFGMGI+K +VRFV H D+P+S
Sbjct: 250 AEAGVEALPYHAGLDAATRAKNQQRFLREDGVVMVATVAFGMGIDKPDVRFVAHLDLPRS 309

Query: 319 VEAYYQETGRAGRDGLDAEAFMLFDPADIGRVRHLIEQQEPGPQ-QQVEYHKLNTMAAFA 377
           +E YYQETGRAGRDGL AEA+M++  +D+  +  +I Q E   + ++VE  KL ++ A+A
Sbjct: 310 IEGYYQETGRAGRDGLPAEAWMIYGLSDVVTMSQMIAQSESDDERKRVERQKLESLLAYA 369

Query: 378 EAQTCRRQVLLHYFDESASEPCGNCDICLDPPKRYDGVEDAQKVLSCIFRLQQKFGVNHL 437
           EA  CRRQ+LL  F ES    CG+CD C+ PPK ++    AQK LS ++R  Q+FG  H+
Sbjct: 370 EATDCRRQLLLGAFGESHPGACGHCDNCVAPPKTWNATVPAQKALSAVYRTGQRFGSGHV 429

Query: 438 IEVLRGSKAASVVDRGHDKLSTWGIGKEKSHEFWLSIIRQIIHLGFASQDITRGSAIKLN 497
           I+VLRG +   V+   H +LST+GIG +   + W S+ RQ++  G    D      ++L 
Sbjct: 430 IDVLRGEETERVLALDHHRLSTFGIGADLDEKQWRSVFRQLLAAGLLEADAEGYGTLRLT 489

Query: 498 PQARAVLKGELPLQLAEPRISITTHVKRRSSSRAPIN----------YDRKLFARLKQLR 547
             +R+VL G   ++L E         +RR S+               Y++ L+  L+ LR
Sbjct: 490 AASRSVLSGGRQVRLREDARPERASRRRRDSTLVTSGKGGGSLGIEAYEQDLWDALRTLR 549

Query: 548 RSLAEELDVPPYLVFNDATLAEMAAMLPTSPGEMLAVNGVGETKLNRFGGEFLDEIN 604
             LA++  VPPY+VF+DATL  M   +P +  E+  V+GVGE KL R+G +FL  IN
Sbjct: 550 TQLAKQQGVPPYVVFHDATLLAMLRAMPANEDELAGVSGVGEAKLKRYGRDFLAVIN 606