Pairwise Alignments

Query, 610 a.a., ATP-dependent DNA helicase RecQ (RefSeq) from Shewanella loihica PV-4

Subject, 609 a.a., ATP-dependent DNA helicase RecQ from Pectobacterium carotovorum WPP14

 Score =  729 bits (1882), Expect = 0.0
 Identities = 354/606 (58%), Positives = 466/606 (76%), Gaps = 6/606 (0%)

Query: 5   LTSPDVTDSDPLAA-CLQTVFGYRTFRTGQREVIEQVCGGQDALVIMPTGGGKSLCYQLP 63
           +++ +V + + LA   L+  FGY+ FR GQ+E+I     GQD LVIMPTGGGKSLCYQ+P
Sbjct: 1   MSTAEVLNKEALAVQVLRDTFGYQQFRPGQQEIISATLSGQDCLVIMPTGGGKSLCYQIP 60

Query: 64  ALVLHGLTLVVSPLISLMKDQVDSLKQMGVAAAYLNSSQSREEALTIYRQLHNGELKLLY 123
           ALV+ GLTLVVSPLISLMKDQVD L+  GV+AA LNS+Q+RE+ L +      G++KLLY
Sbjct: 61  ALVMDGLTLVVSPLISLMKDQVDQLQAYGVSAACLNSTQTREQQLEVMAGCRTGQIKLLY 120

Query: 124 VSPERLLTDSFIERLHNLPLSLFAIDEAHCISQWGHDFRPEYAALGQLKQLFPRVPMMAL 183
           ++PERL TDSF++ L +  +SL A+DEAHCISQWGHDFRPEY ALGQ+KQ FP +P +AL
Sbjct: 121 IAPERLTTDSFLDHLAHWQISLIAVDEAHCISQWGHDFRPEYRALGQIKQRFPHLPFIAL 180

Query: 184 TATADKATREDICQRLGI-APFELLTSFDRPNIRYTVAEKLNAANQLRQFIQAQNGNSGI 242
           TATAD+ TR DI + L + +P   ++SFDRPNIRYT+ EK    +QL  F+Q Q G SGI
Sbjct: 181 TATADETTRNDIVRLLDLQSPLIQISSFDRPNIRYTLVEKFKPLDQLWMFVQGQRGKSGI 240

Query: 243 IYCSSRRRVDEVAERLRMQGYHADAYHAGKTQEERADIQERFLKDQLDIVVATVAFGMGI 302
           IYC+SR RV+++  RL+ +G  A AYHAG   E RA +QE FL+D L +VVATVAFGMGI
Sbjct: 241 IYCNSRSRVEDICARLQARGLSAGAYHAGLDNERRAQVQEAFLRDDLQVVVATVAFGMGI 300

Query: 303 NKSNVRFVVHYDIPKSVEAYYQETGRAGRDGLDAEAFMLFDPADIGRVRHLIEQQEPGPQ 362
           NK NVRFVVH+DIP+++E+YYQETGRAGRDGL AEA + +DPAD+  +R  +E++  GPQ
Sbjct: 301 NKPNVRFVVHFDIPRNIESYYQETGRAGRDGLAAEAALFYDPADMAWLRRCLEEKPAGPQ 360

Query: 363 QQVEYHKLNTMAAFAEAQTCRRQVLLHYFDESASEPCGNCDICLDPPKRYDGVEDAQKVL 422
             +E HKLN M AFAEAQTCRR VLL+YF E   + CGNCDICLDPPKRYDG+ +AQK L
Sbjct: 361 LDIERHKLNAMGAFAEAQTCRRLVLLNYFGEGRQQACGNCDICLDPPKRYDGLVEAQKAL 420

Query: 423 SCIFRLQQKFGVNHLIEVLRGSKAASVVDRGHDKLSTWGIGKEKSHEFWLSIIRQIIHLG 482
           SC++R+ Q+FG+ +++EVLRG+    + D GHDKL  +GIGKEKS E W+S++RQ+IHLG
Sbjct: 421 SCVYRVGQRFGLGYIVEVLRGANNQRIRDFGHDKLPVYGIGKEKSQEHWVSVLRQLIHLG 480

Query: 483 FASQDITRGSAIKLNPQARAVLKGELPLQLAEPRISITTHVKRRSSSRA-PINYDRKLFA 541
             +Q+IT  SA++L   AR VL+GE+PLQLA PR+    ++K R++ ++   NYDRKLFA
Sbjct: 481 LLNQNITMHSAVQLTESARPVLRGEMPLQLAVPRV---INLKPRANQKSYGGNYDRKLFA 537

Query: 542 RLKQLRRSLAEELDVPPYLVFNDATLAEMAAMLPTSPGEMLAVNGVGETKLNRFGGEFLD 601
           +L++LR+S+A+E ++PPY+VF+DATL EMA ++P + GE+L +NGVG  KL RFG  F++
Sbjct: 538 KLRKLRKSIADEDNIPPYVVFSDATLLEMAELMPITAGELLNINGVGHRKLERFGAPFMN 597

Query: 602 EINDYL 607
            I D++
Sbjct: 598 MIRDHV 603