Pairwise Alignments

Query, 610 a.a., ATP-dependent DNA helicase RecQ (RefSeq) from Shewanella loihica PV-4

Subject, 611 a.a., ATP-dependent DNA helicase RecQ from Escherichia coli ECRC99

 Score =  703 bits (1814), Expect = 0.0
 Identities = 346/582 (59%), Positives = 441/582 (75%), Gaps = 3/582 (0%)

Query: 20  LQTVFGYRTFRTGQREVIEQVCGGQDALVIMPTGGGKSLCYQLPALVLHGLTLVVSPLIS 79
           LQ  FGY+ FR GQ E+I+ V  G+D LV+MPTGGGKSLCYQ+PAL+L+GLT+VVSPLIS
Sbjct: 19  LQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLTVVVSPLIS 78

Query: 80  LMKDQVDSLKQMGVAAAYLNSSQSREEALTIYRQLHNGELKLLYVSPERLLTDSFIERLH 139
           LMKDQVD L+  GVAAA LNS+Q+RE+ L +      G+++LLY++PERL+ D+F+E L 
Sbjct: 79  LMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTGQIRLLYIAPERLMLDNFLEHLA 138

Query: 140 NLPLSLFAIDEAHCISQWGHDFRPEYAALGQLKQLFPRVPMMALTATADKATREDICQRL 199
           +    L A+DEAHCISQWGHDFRPEYAALGQL+Q FP +P MALTATAD  TR+DI + L
Sbjct: 139 HWNPVLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALTATADDTTRQDIVRLL 198

Query: 200 GIA-PFELLTSFDRPNIRYTVAEKLNAANQLRQFIQAQNGNSGIIYCSSRRRVDEVAERL 258
           G+  P   ++SFDRPNIRY + EK    +QL +++Q Q G SGIIYC+SR +V++ A RL
Sbjct: 199 GLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGIIYCNSRAKVEDTAARL 258

Query: 259 RMQGYHADAYHAGKTQEERADIQERFLKDQLDIVVATVAFGMGINKSNVRFVVHYDIPKS 318
           + +G  A AYHAG     RAD+QE+F +D L IVVATVAFGMGINK NVRFVVH+DIP++
Sbjct: 259 QSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAFGMGINKPNVRFVVHFDIPRN 318

Query: 319 VEAYYQETGRAGRDGLDAEAFMLFDPADIGRVRHLIEQQEPGPQQQVEYHKLNTMAAFAE 378
           +E+YYQETGRAGRDGL AEA + +DPAD+  +R  +E++  G  Q +E HKLN M AFAE
Sbjct: 319 IESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCLEEKPQGQLQDIERHKLNAMGAFAE 378

Query: 379 AQTCRRQVLLHYFDESASEPCGNCDICLDPPKRYDGVEDAQKVLSCIFRLQQKFGVNHLI 438
           AQTCRR VLL+YF E   EPCGNCDICLDPPK+YDG  DAQ  LS I R+ Q+FG+ +++
Sbjct: 379 AQTCRRLVLLNYFGEGRQEPCGNCDICLDPPKQYDGSTDAQIALSTIGRVNQRFGMGYVV 438

Query: 439 EVLRGSKAASVVDRGHDKLSTWGIGKEKSHEFWLSIIRQIIHLGFASQDITRGSAIKLNP 498
           EV+RG+    + D GHDKL  +G+G++KSHE W+S+IRQ+IHLG  +Q+I + SA++L  
Sbjct: 439 EVIRGANNQRIRDYGHDKLKVYGMGRDKSHEHWVSVIRQLIHLGLVTQNIAQHSALQLTE 498

Query: 499 QARAVLKGELPLQLAEPRISITTHVKRRSSSRAPINYDRKLFARLKQLRRSLAEELDVPP 558
            AR VL+GE  LQLA PRI        + S     NYDRKLFA+L++LR+S+A+E +VPP
Sbjct: 499 AARPVLRGESSLQLAVPRIVALKPKAMQKSFGG--NYDRKLFAKLRKLRKSIADESNVPP 556

Query: 559 YLVFNDATLAEMAAMLPTSPGEMLAVNGVGETKLNRFGGEFL 600
           Y+VFNDATL EMA  +P +  EML+VNGVG  KL RFG  F+
Sbjct: 557 YVVFNDATLIEMAEQMPITASEMLSVNGVGMRKLERFGKPFM 598