Pairwise Alignments

Query, 443 a.a., UDP-N-acetylmuramoylalanine--D-glutamate ligase (RefSeq) from Shewanella loihica PV-4

Subject, 448 a.a., UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9) from Pseudomonas fluorescens GW456-L13

 Score =  372 bits (956), Expect = e-107
 Identities = 213/448 (47%), Positives = 285/448 (63%), Gaps = 14/448 (3%)

Query: 1   MASQYTHIVLGLGATGLSVVRYLIKQGITPLVMDSRENPPGRETLSQEFPEVLLLTGGFD 60
           +AS +  IV+GLG +G+S+VR+L  +G+   V D+RENPP    L +++P V +  G  D
Sbjct: 4   IASDHFRIVVGLGKSGMSLVRFLANRGVAFAVADTRENPPELAALKRDYPHVEVRCGELD 63

Query: 61  CRYLVQASQIVVSPGIPLDTAEVRAAVDMGIDIVGDVELFARALADRPACVIGITGSNGK 120
             +L +A ++ VSPG+ L T  ++AA   G+ + GD+ELFAR   +  A ++ I+GSN K
Sbjct: 64  VEFLCRADELYVSPGLALATPALQAAAARGVKLSGDIELFAR---NAKAPIVAISGSNAK 120

Query: 121 STVTTLVGEMAAKAGLKVAVGGNIGVPVLDLLDGDHELFVLELSSFQLETTSSLNCISAT 180
           STVTTLVGEMAA AG +VAVGGN+G P LDLL  D EL+V+ELSSFQLETT  LN   AT
Sbjct: 121 STVTTLVGEMAAAAGKRVAVGGNLGTPALDLLSDDIELYVMELSSFQLETTDQLNAEVAT 180

Query: 181 CLNISEDHMDRYSDLESYRQAKLRLYDQTKLAIFNRDDLLTRP--NEPMNQNSFGLSLPE 238
            LNISEDHMDRYS L +Y  AK R++   +  + NR D L+RP   E     +FGLS P+
Sbjct: 181 VLNISEDHMDRYSGLPAYHLAKHRIFRGARQFVVNRQDALSRPLMGEGQPCWTFGLSKPD 240

Query: 239 GDEWGV----NHGVLVHGTTEYVAGAQVSLVGSHNQANLLVAMALADSAGVDKAAMVEVA 294
              +G+        L       +   ++ + G+HNQ+N L A+AL  + G+   AM+   
Sbjct: 241 FKAFGIREEDGEKYLGFEFQNLMPVRELKIRGAHNQSNALAALALGHAVGLPFDAMLSSL 300

Query: 295 KQFKGLAHRCELVGKHQGVSYVNDSKATNVGATIAALQGL-SDHEGQIILIAGGDGKGAD 353
           + F GL HRC+ V    GV Y NDSKATNVGA +AA++GL +D +G+I+LIAGGDGKGA+
Sbjct: 301 RTFAGLEHRCQWVRDLDGVGYYNDSKATNVGAALAAIEGLGADIDGKIVLIAGGDGKGAE 360

Query: 354 FSTLRGAL-LGVGQVITLGKDGDRIAEQFDGA---IRVESMQEAVAQAAQLAKPGDLVLL 409
           F  LR  +      V+ +G+D D+I E    A   IR  S+ EAV Q    A+PGD+VLL
Sbjct: 361 FKDLRDPVAANCRAVVLMGRDSDKIGEAIGDAVPLIRAGSLVEAVEQCRAAAQPGDVVLL 420

Query: 410 SPACASLDMYANFMARGDDFRAQVEALA 437
           SPACAS DM+ N+  RG  F   VE LA
Sbjct: 421 SPACASFDMFKNYEDRGHQFVQAVEDLA 448