Pairwise Alignments

Query, 493 a.a., integral membrane sensor signal transduction histidine kinase (RefSeq) from Shewanella loihica PV-4

Subject, 595 a.a., histidine kinase from Pseudomonas simiae WCS417

 Score = 96.7 bits (239), Expect = 2e-24
 Identities = 84/309 (27%), Positives = 140/309 (45%), Gaps = 36/309 (11%)

Query: 207 RLTQALGELEHKP-IDQPLALPLAPSRSQEM-----AQLNGQINRL---LEEVAQKQ--- 254
           RL Q LGE   +P +D+ L L L     +        ++ G++  L   L  V+  Q   
Sbjct: 297 RLGQGLGEALVRPELDEQLQLVLRGGSLERAPEDLEVEVEGELRLLTYSLTPVSHTQGHI 356

Query: 255 -------RQVTAQQA---AKQEFLLHLSHDLKTPLTTL---LGYLDTWLLSPADARDDSL 301
                    VT Q+A    + EF+L  SH+L+TP+T +    G        PA++R+  L
Sbjct: 357 LGAVMVLHDVTEQRAFERVRSEFVLRASHELRTPVTGMHMAFGLFRERAKFPAESREADL 416

Query: 302 LQYAAASGQKLQQLLAQMLELAALENGQIKANMRRVSLQSILDELNQTFTPKAKRAEVSL 361
           L       Q+L QL+  +L  +  +NG  K  +    +  +L+     F   A    + L
Sbjct: 417 LDTVNEEMQRLMQLINDLLNFSRYQNGLQKLTLGPCDVTDLLEHARARFVEPANAQNIEL 476

Query: 362 RLGQGESEGESEFLYTDPQLMSRVLNNLLDNALRHTPPGGEIAVYPQTLASGSYLVIQDS 421
            +   E++ +   LY D   + RVL+NLL NALRHT  GG+I +  +       + ++D+
Sbjct: 477 LV---EAQSDLPRLYADQAQLERVLDNLLGNALRHTAAGGQIRLQARRHGERVIVSVEDN 533

Query: 422 GSGMQPEAIAALQHTPSPSQPELYYCRGETLPQLGVGLAIVRQLLARLGCRIEVQSATDR 481
           G G        + +       E +   G      G+GLA+ ++++   G R+ V S   +
Sbjct: 534 GEG--------IAYGQQGRIFEPFVQVGRKKGGAGLGLALCKEIVQLHGGRMGVYSRPGQ 585

Query: 482 GSRFMIALP 490
           G++F +ALP
Sbjct: 586 GTQFYMALP 594