Pairwise Alignments

Query, 493 a.a., integral membrane sensor signal transduction histidine kinase (RefSeq) from Shewanella loihica PV-4

Subject, 633 a.a., histidine kinase from Pseudomonas simiae WCS417

 Score = 94.7 bits (234), Expect = 8e-24
 Identities = 86/308 (27%), Positives = 151/308 (49%), Gaps = 40/308 (12%)

Query: 196 LLLRYLT---RPLNRLTQALGELEHKPIDQPLALPLAPSRSQEMAQLNGQINRLLEEVAQ 252
           +L+R +T   R    L QA   LE +             R+ E+  LN Q   LL+E+ +
Sbjct: 208 VLIRDITERRRTAEALHQAYQHLEQR----------VAQRTSELTALNDQ---LLQEIDE 254

Query: 253 KQR--------QVTAQQA--AKQEFLLHLSHDLKTPLTTLLGYLDTWLLSPADARDDSLL 302
           ++R        ++ A+QA  +K +FL  +SHDL  PL     +    L  P++    +L+
Sbjct: 255 RRRVEARLREAKLEAEQANLSKTKFLAAVSHDLLQPLNAARLFTSALLERPSE----TLV 310

Query: 303 QYAAASGQKLQQLLAQMLELAALENGQIKANMRRVSLQSILDELNQTFTPKAKRAEVSLR 362
           +  + S + ++ LL  +++++ L+ G IKA++   +L  +LD L   +T  A+   ++L 
Sbjct: 311 RNVSNSLEDVENLLGTLVDISKLDAGVIKADIAPFALSELLDNLAAEYTELARSEGLALH 370

Query: 363 LGQGESEGESEFLYTDPQLMSRVLNNLLDNALRHTPPGGEIAVYPQTLASGSYLVIQDSG 422
                  G S  + +D QL++R+L NLL NA+R+T   G + +  +       + + DSG
Sbjct: 371 F-----VGCSALVRSDIQLLARILRNLLSNAIRYTY-NGRVVLGCRRQHQRLLIQVWDSG 424

Query: 423 SGMQPEAIAALQHTPSPSQPELYYCRGETLPQLGVGLAIVRQLLARLGCRIEVQSATDRG 482
            G+  E +  +         +    R +    LG+GLAIV ++   LG RI V+S   +G
Sbjct: 425 MGIAEERLEEIFQEFKRGDVQ----RPDQDRGLGLGLAIVEKIAGILGHRISVKSWPGKG 480

Query: 483 SRFMIALP 490
           S F + +P
Sbjct: 481 SMFSVEVP 488